Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01173 ATGCCGTCCAAAAATCTTATGGCGGAGAGGCGGCGAAGGAAGAAGCTCAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCAAATATTAGCAAGATGGATAGAGTTTCGATACTTGGAGATGCAATTGACTACATGAAGGAGTTACAGCAGCGGGTCAATGATCTTCAAAATGAACTGGAGTCAACTCCAACTAGCTCTTCGCCATCATCTTCCACCAGCATTCAACCTTTGACACCCACACTGCAAACCCTTCCTTGCCGGGTGAAGGAAGAACTGTGTCCCGTGCCAATCCCAGGAAACCAAACAGCAAAGGTGGAAGTTAAGGTAAGGGACGGCAAAGCTGTCAACATTCACATGTTTTGTAGCCGCCGACCAGGTCTTCTGGTCTCTACAATGCAGGCTTTGGATAACCTCGGATTAGATGTTCAACAAGCTGTTATTAGCTGCTTCAATGGTTTTGCTTTAGACATCTTCAAAGCTGAGCAATGCAGAGAAGGGCAGGATGTGCTTCCTGAGGAAATCAAAGCAGGTCTGCTGGATTCAGCAGGATCCAAATAA 561 0.4635 MPSKNLMAERRRRKKLNDRLYMLRSVVPNISKMDRVSILGDAIDYMKELQQRVNDLQNELESTPTSSSPSSSTSIQPLTPTLQTLPCRVKEELCPVPIPGNQTAKVEVKVRDGKAVNIHMFCSRRPGLLVSTMQALDNLGLDVQQAVISCFNGFALDIFKAEQCREGQDVLPEEIKAGLLDSAGSK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01173 186 Gene3D - 3 64 IPR036638 GO:0046983
Adu09g01173 186 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Adu09g01173 186 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 68 IPR036638 GO:0046983
Adu09g01173 186 PANTHER BHLH TRANSCRIPTIONAL FACTOR 1 185 - -
Adu09g01173 186 MobiDBLite consensus disorder prediction 57 78 - -
Adu09g01173 186 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 185 - -
Adu09g01173 186 Pfam Helix-loop-helix DNA-binding domain 7 50 IPR011598 GO:0046983
Adu09g01173 186 CDD bHLH_AtAMS_like 3 61 - -
Adu09g01173 186 SMART finulus 6 55 IPR011598 GO:0046983
Adu09g01173 186 Coils Coil 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01173 Adu-Chr9 25238851 25244735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01173 1 162 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 78.659 6.90e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu09g01173 HLH 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01173 - - ahf:112697118 335.109