Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01168 ATGGCGAACCCGGGTAAGGCACACTGGGAAGCAGTCAAGTGGATATTAAGATACTTGAAGGGTACCATTGACACAGGTTTATGCTTTAGTGGAAAATCATGTCAAATCAGCGGCTTTGTTGATTCTGATTATGCTGGTGATCTAGATAGAAGACGTTCTATGACTGGTTATGTATATAAAATACAAGGTGCTCCAGTTAGTTGGCGATCGATGTTACAAGCTATAGTGATACTATCTACTACAGAGGCTGAGTACATGGCAATAGCAGAAGGGAGTAACAGTGAAGAACACCACTCTCCTCATAGTGTCGACATCATGGTTTGCCAAGAACAAGAGGCATTAGTCAACAAAGTGCTTGACCTGTACCACAAGATTTCAAGCTTAGACACCCTCAAACCCTCCCAAGATGTCGACACCCTCTTCACCCAACTCGTTCGCACATGCATCCCTCATACCCCATTCATCGACATCACTAAACTTTCCACAACCGTCCAAGAAGCTAGATCCAACCTAATTCGTCTTTGCAACATTCTTAGCCAGCACTGCCAGGCTGTTCCCACCAAGATTGCCTTCGTGGGCTCTGGCCCTCTTCCCTTAACCTCCATTGTCCTGGCTACCAACCACTTTCCCAGCACCACATTCCATAATTATGACATCGACGCTTTGGCCAATTCTATGGCCAAGGCGTTGGTGTCTTCGGATCATGACCTGTCAAAGCGCATGGTCTTTCACACTAGCGACATATTAGATGTGTCCCATGGTTTGAACGAGTTCAATGTTGTTTTTCTTGCCGCGCTCGTGGGAATGAAAAATGAGGAGAAGAAAAAAGTGATTGATCATTTGGGTAAGTATATGGCACCTGGGGCATTTCTTATGGTAAGAAGTGCCTATAGTGCCAGGGCATTTCTATATCCGGTAGTCAATCCTTCTTTTGATCTCAAAGGATTTGAAGTTTTGTCCGTGTTTCACCCCACTGATGAGGTTATCAATTCGGTTGTGATTGCGCGAAAGTGTCCGATTATTTCAACATCGTCGAAAGAGGTTCAATCGCTCTTCAATAACAATAACCTTCTCATCAATGGGAACATGATTGAGGAATTGGTAACTGAGGAGCAGCTTTAA 1122 0.4439 MANPGKAHWEAVKWILRYLKGTIDTGLCFSGKSCQISGFVDSDYAGDLDRRRSMTGYVYKIQGAPVSWRSMLQAIVILSTTEAEYMAIAEGSNSEEHHSPHSVDIMVCQEQEALVNKVLDLYHKISSLDTLKPSQDVDTLFTQLVRTCIPHTPFIDITKLSTTVQEARSNLIRLCNILSQHCQAVPTKIAFVGSGPLPLTSIVLATNHFPSTTFHNYDIDALANSMAKALVSSDHDLSKRMVFHTSDILDVSHGLNEFNVVFLAALVGMKNEEKKKVIDHLGKYMAPGAFLMVRSAYSARAFLYPVVNPSFDLKGFEVLSVFHPTDEVINSVVIARKCPIISTSSKEVQSLFNNNNLLINGNMIEELVTEEQL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01168 373 PANTHER SYNTHASE, PUTATIVE-RELATED 177 372 - -
Adu09g01168 373 PANTHER NICOTIANAMINE SYNTHASE 3 106 175 IPR004298 GO:0030410|GO:0030418
Adu09g01168 373 PANTHER SYNTHASE, PUTATIVE-RELATED 106 175 - -
Adu09g01168 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 199 324 IPR029063 -
Adu09g01168 373 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 53 342 IPR004298 GO:0030410|GO:0030418
Adu09g01168 373 CDD RNase_HI_RT_Ty1 38 92 - -
Adu09g01168 373 Pfam Nicotianamine synthase protein 176 339 IPR004298 GO:0030410|GO:0030418
Adu09g01168 373 Gene3D Vaccinia Virus protein VP39 166 339 IPR029063 -
Adu09g01168 373 PANTHER NICOTIANAMINE SYNTHASE 3 177 372 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01168 Adu-Chr9 24911032 24914423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01168 106 367 Nicotianamine Synthase Gene Family AT5G04950 47.040 3.07e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01168 K05953 - gmx:100803630 313.923