Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01119 ATGGGTTCTGATCTGAAAGTTGAATTGTCCAAGAAAACTCCAATTTTTGGTATTAAGGTTTGGGAAGTAATTGGAATTGCGGTTGGATTATTCATTATAGTGATCCTTTGTGTGCTCTCATTTTGCCTTAGTTCAAGGAAGAAGTCTAAAAAGGATAGAGATAACAAGGTTCCTGTTAGTCAAATACCTACAGTGTCGAAGGAAATCAAGGAGGTGAGGGTTGAGCAAGTGCCGGCGAATGGATTTGTCCCGCGAGATGGAATACTCCTCACAATTCATGATAAGTCCAGTGACAGAGAATCAGACAAAGTTATGGTTCACTTGGGTGTGGGGAAAATGAAGCATGGGGATAGTGGCAGCCACTCAGATTCATTTCATCACTTGGAGAAAGATGGATATGGATCACAGTCAGGGGAAGAAGGTAGCTCCGGCACGTTTAAAGCAGCATACAATCCGTCTTCTTCGTATCCTATAACAGCCCCTTCGCCTCTGTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACATTGAGGGATCTTGAACTTGCCACAAACCGGTTTTCGAAGGAGAATGTCCTTGGTGAAGGTGGCTATGGAGTTGTTTATAGGGGACAGTTGATAAATGGGACTTCAGTGGCAGTTAAGAGGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGGGTCGAAGTTGAAGCTATTGGCCATGTTCGACATAAAAATTTAGTTCGTCTTTTGGGGTATTGCATTGAGGGGACTCACAGGATATTAGTGTACGAGTATGTTAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCAATGCGTCATCATGGATATCTAACCTGGGAAGCGCGTATCAAGATTCTTCTGGGAACGGCTAAAGCgcttgcttatttgcatgaagcaattgaaccaaaggttgtacaccgagatatcaagtcgagcaacatattaattgatgacgacttcaatgccaaggtttctgattttggcctggccaaGTTACTGGGTGCTGGGAAGAGTCATGTTACAACAAGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTAAATGAGAAGAGTGATGTTTATAGTTTTGGTGTTGTGCTGCTCGAAGCAATTACTGGAAGAGATCCAGTCGACTATGGCCGTCCACCACAGGAAGTGAGTAAATTTTCCATTTATCACATCTTTAAATTGTTTCCAACACAGCATATGTTTTGTCACTTTATTCCAGCTAGTCAGCTACCTTATCATTTGGGAATGCATCATGTTGTAGTGAAGCCATCAACCAGAGCTTTGAAACGGGCTCTCTTAACAGCTTTAAGATGTGTTGATCCAGATCATGTCAAAAGACCCAAGATGGGCCAAGTCGTACGAATGCTCGAGTCAGAGGAATACCCTTTACCCAGAGAGGATAGAAGGCAGCGAAGAAATTGTGGAAATAACTGGGAAATCGAATCCCAGAAGGATCATTCGGACACAGACAGGAGCGAGATTCAGGGTTCTGTATCAGAGAGTGGAGGggctttaaagtcagcaagaaaagtagtggaaGGAGATGAAGTTGCACAATATGCACTTATTTGGGATTATACTAACCAACTGTGGACCACCAACCCAGGTTCAACAGTTCAAGTTGGTGTCATTCCCATGCCTGAGAGTCCTCCACAGTTTCGAATATTTTATGTATGTCTCGATGAGTGTAAGAAAGGATTTAAGGCCAGGTGTAGACTATTGATTGGTTTGGACGGAGCCTTTCTGAAGACCTTGCATGGAGGACAGTTGCTGACTGCTTGTGGCCAAGATGCCAACAATCGTGTGTTCGTGATTGCTTATGAAATTTTGGATGTCAAAAATAGAGACAACTGGCAATAG 1917 0.3991 MGSDLKVELSKKTPIFGIKVWEVIGIAVGLFIIVILCVLSFCLSSRKKSKKDRDNKVPVSQIPTVSKEIKEVRVEQVPANGFVPRDGILLTIHDKSSDRESDKVMVHLGVGKMKHGDSGSHSDSFHHLEKDGYGSQSGEEGSSGTFKAAYNPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLINGTSVAVKRILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPPQEVSKFSIYHIFKLFPTQHMFCHFIPASQLPYHLGMHHVVVKPSTRALKRALLTALRCVDPDHVKRPKMGQVVRMLESEEYPLPREDRRQRRNCGNNWEIESQKDHSDTDRSEIQGSVSESGGALKSARKVVEGDEVAQYALIWDYTNQLWTTNPGSTVQVGVIPMPESPPQFRIFYVCLDECKKGFKARCRLLIGLDGAFLKTLHGGQLLTACGQDANNRVFVIAYEILDVKNRDNWQ 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01119 638 PANTHER OS01G0323000 PROTEIN 3 518 - -
Adu09g01119 638 MobiDBLite consensus disorder prediction 114 134 - -
Adu09g01119 638 MobiDBLite consensus disorder prediction 483 520 - -
Adu09g01119 638 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Adu09g01119 638 Gene3D Transferase(Phosphotransferase) domain 1 267 491 - -
Adu09g01119 638 Pfam Protein kinase domain 192 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01119 638 ProSiteProfiles Protein kinase domain profile. 191 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01119 638 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Adu09g01119 638 SMART serkin_6 191 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g01119 638 SUPERFAMILY Protein kinase-like (PK-like) 165 478 IPR011009 -
Adu09g01119 638 MobiDBLite consensus disorder prediction 114 146 - -
Adu09g01119 638 MobiDBLite consensus disorder prediction 483 512 - -
Adu09g01119 638 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 518 - -
Adu09g01119 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Adu09g01119 638 CDD STKc_IRAK 197 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01119 Adu-Chr9 21829302 21837369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01119 132 478 Trihelix Transcription Factor Family AT1G70460 46.418 9.66e-84 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu09g01119 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01119 - - gmx:100787014 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01119 09 21829302 21837369 Adu06g00485 06 5770222 5774853 PCT