Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01114 ATGGGAAGAGCTCCATGCTGTGAGAAAGTAGGGTTGAAGAGAGGAAGATGGACAGCTGAAGAAGATACATTGCATGAAGCAATTACTATCATCATTCTATTGGTAGGTGTTGTTAGCATACCATCATCAATGATGGGAAGAGCTCCATGCTGTGAGAAAGTGGAGTTGAAGAGAGGAAAATGGATAGCTGAAGAAGATAGGATATTGACTCAATACATAGAAGAACATGGGGAGGGTTCATGGAGGTCGTTGCCTAAGAATGCTGGACTCTTAAGACTCAGATGGATAAACTACCTCAGATCAGATGTCAAGAGAGGCAACATCACTCCCCAAGAGGAAGAGATCATTGTCAAGTTGCATGCTGTTCTTGGTAATAGGTGGTCAGTGATAGCAGGGCATTTACCAGGAAGAACATACAATGAGATAAAGAACTATTGGAACTCACGTTGGATCAGGAGAAAAATTTATTGCTTCATGAAATCTTTGAATGATTATTCCTCCTTTCCTCCCACCATTGACAATTGCTGCATTAAAAGCTTCCAAGAGAAGAGCACCTACTCGATCTACTGCACCTAA 576 0.4167 MGRAPCCEKVGLKRGRWTAEEDTLHEAITIIILLVGVVSIPSSMMGRAPCCEKVELKRGKWIAEEDRILTQYIEEHGEGSWRSLPKNAGLLRLRWINYLRSDVKRGNITPQEEEIIVKLHAVLGNRWSVIAGHLPGRTYNEIKNYWNSRWIRRKIYCFMKSLNDYSSFPPTIDNCCIKSFQEKSTYSIYCT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01114 191 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 23 - -
Adu09g01114 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 154 IPR017930 -
Adu09g01114 191 ProSiteProfiles Myb-like domain profile. 53 99 IPR001005 -
Adu09g01114 191 CDD SANT 109 150 IPR001005 -
Adu09g01114 191 SUPERFAMILY Homeodomain-like 55 146 IPR009057 -
Adu09g01114 191 ProSiteProfiles Myb-like domain profile. 100 150 IPR001005 -
Adu09g01114 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 99 IPR017930 -
Adu09g01114 191 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 46 173 - -
Adu09g01114 191 SMART sant 57 101 IPR001005 -
Adu09g01114 191 SMART sant 104 152 IPR001005 -
Adu09g01114 191 PANTHER MYB TRANSCRIPTION FACTOR 2 23 - -
Adu09g01114 191 PANTHER MYB TRANSCRIPTION FACTOR 46 173 - -
Adu09g01114 191 Pfam Myb-like DNA-binding domain 105 148 IPR001005 -
Adu09g01114 191 CDD SANT 60 99 IPR001005 -
Adu09g01114 191 Gene3D - 51 105 - -
Adu09g01114 191 Gene3D - 109 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01114 Adu-Chr9 21588966 21590435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01114 45 160 MYB Transcription Factor Family AT2G47460 72.131 5.25e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g01114 Myb_DNA-binding 3.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01114 K09422 - gmx:100805532 222.631