Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01098 ATGCCTCTGTATGAGTTATACCGGCTTTCTAGAGAGAAGCTTGATGAAGAGATTAATGGCACACGTGCAACTGATCAGTCTCGATCTTCCTCGCCTGAGAAGGATTTTTTCGAGCTAATTTGGGAAAACGGCAACATTTTGACAACGCAGGGTCAGTCTAGTAGAGCTAAGAAGAGTCCACCTCGCCGGAGCTTACCATCTCACTGCTTGCCATCTCACAGTCCCAAGGGTAGAGACAGAGATGCAGGGTATGTTAACAATCCAAGGGTAGGGAAGTCTGGTGATTTAGACACCGGATTGAATGAAATTTCGATGTCAGTGCCGTCGACTGAAGTGGATTTGGGTCATGATGATGATGTCATACCTTGGTTGGATTATACAATGGATGGCTCTTTGCAGAATGAGTATGGTTCTAATTTCTTACATGAACTATCCGGGGTCACGGATCAAGACTTGCCCTCAAATCATTTTTCGCTTGTGGATAAAAGTAGTGGTAATCAGGTATTTAGGGACTCTCATAAGAATTCTGCAGAGCAAAGCAACTTTTCCAGTGTTTCTTCGACCGGCGTAGATGAGACAACTAGACCTAAAGCTAGCACGGTTGAATCATACCTGCCATCATCATTCATTTCAGTTAGACCAAGAGTATCGGATGTTACTGCGAACAATACCAGTAATGCAATGCTTCATCCACCAGTTACTGAGATTCCTTCTTCATCGAGTGATTTTTCGAGCTTAAAGATGCAGAAGCAAGATCAAGTTATTCCTAGCAATGGTTCATCTGTTATGAATTTCTCCCATTTCGCAAGGCCTGCCGCCATCGTGAGAGCTAATCTTCAGAACATTGGATTGAAGTCTGTTTCGTCTTCAACAAGATCTGAAAATGTGGAAAGTATGAATAAAGGTGCTGTTGTACCTAGCAGTAATCTTCCAGAATCAACTCTTGCCGATTCATGTAGTGAATGTCCAAAGGTTCTAATGGGGAACAATGAGAAGGCTGTGGAACAATCCAGGGATGATTTGAAACTGTTGGAGTCAAAATCTCTCGAACAGAACATTGCCGGTTCTAAACAATTAGACCCTACTTGCAAAGAGAAAGCCATTAAAATTGATCAAACTTCCAACCGAGTTCTTGGTGAAACTGCCACTAACACACAGATAGCTGCTGAAAGAAGTACGGAGCTGGTGGTAGCCTCTTCCTCTGTTGGCTCTGGCAACTGTGCAGACAGAGGTTCAGACGATCCAATTCAAAATTTGAAGCGGAAAAATCGAGACACTGAGGACTCTGAATGGCATAGTGATGATGTTGAGGAAGAATCAGTGGGTGTTAAAAAAGCAGCTGCTGGGCGTGGAGCTTCGGGTTCCAAGAGAAGTCGTGCTGCTGAAGTGCATAATCTTTCTGAAAGGAGGCGAAGAGATAGGATCAACGAGAAGATGCGTGCATTACAAGAACTCATACCCAATTGCAATAAGGTGGATAAAGCTTCAATGCTGGATGAGGCTATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATGATGTCAATGGGAGCCGGTTTGTATATGCATCCGATGATGTTGCCACATGGAATGCAGCACATGCATGCACCACACTTGGCTCCTTTTTCGCCTATGGCCTATGGAATGCAAATGGGATTGGGTATGGGATATGGCATGGCTATGCCTGATATGAATGGTGTATCATCTCGATTCCCAATGGTTCAGGTTCCCCAAATGCAAGGAACTCATGTCCCTGTTGCACAAATGTCTGGACCTACTGCAATGGTTAGATCAAATACTCAAGGGTTCGGGGTTCCAGGTCAGGGATTTCCCTTGCCACTCCCTCGTGCACCCTTATTTCCTTTCTCGGGAGGGCCGGTTATGAACTCATCGTCGGCTTTGGGATTACGTCCTTGTGGAACAACAGGGCTTAGTCAAACTGCGGATCTGGCGTCAACATCTGGCTTAAAGGACCCTTCGCCAAATACGGATTCACTAGTAAAGCAAAGTACTGGTGGTGGCGGCTGCGACTCAACTAGTCAGATGCCTATCCAGTGTGAAGCAGCAGCAACAACTGTTGGATTTGAACAGTCATCAATGGTACATAATAGCAGCCATACCTCTGAGGCTAATGACAGTGGAACTCTTAATCCTGACAAAGAAGATAATAACCTTGTGACTGGTAATTCCTTTTCTGTCTTTTAA 2208 0.4452 MPLYELYRLSREKLDEEINGTRATDQSRSSSPEKDFFELIWENGNILTTQGQSSRAKKSPPRRSLPSHCLPSHSPKGRDRDAGYVNNPRVGKSGDLDTGLNEISMSVPSTEVDLGHDDDVIPWLDYTMDGSLQNEYGSNFLHELSGVTDQDLPSNHFSLVDKSSGNQVFRDSHKNSAEQSNFSSVSSTGVDETTRPKASTVESYLPSSFISVRPRVSDVTANNTSNAMLHPPVTEIPSSSSDFSSLKMQKQDQVIPSNGSSVMNFSHFARPAAIVRANLQNIGLKSVSSSTRSENVESMNKGAVVPSSNLPESTLADSCSECPKVLMGNNEKAVEQSRDDLKLLESKSLEQNIAGSKQLDPTCKEKAIKIDQTSNRVLGETATNTQIAAERSTELVVASSSVGSGNCADRGSDDPIQNLKRKNRDTEDSEWHSDDVEEESVGVKKAAAGRGASGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMHPMMLPHGMQHMHAPHLAPFSPMAYGMQMGLGMGYGMAMPDMNGVSSRFPMVQVPQMQGTHVPVAQMSGPTAMVRSNTQGFGVPGQGFPLPLPRAPLFPFSGGPVMNSSSALGLRPCGTTGLSQTADLASTSGLKDPSPNTDSLVKQSTGGGGCDSTSQMPIQCEAAATTVGFEQSSMVHNSSHTSEANDSGTLNPDKEDNNLVTGNSFSVF 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01098 735 MobiDBLite consensus disorder prediction 646 681 - -
Adu09g01098 735 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 459 508 IPR011598 GO:0046983
Adu09g01098 735 Gene3D - 454 517 IPR036638 GO:0046983
Adu09g01098 735 PANTHER TRANSCRIPTION FACTOR PIF3 1 674 IPR044273 GO:0003700|GO:0006355
Adu09g01098 735 CDD bHLH_AtPIF_like 459 521 - -
Adu09g01098 735 SMART finulus 465 514 IPR011598 GO:0046983
Adu09g01098 735 MobiDBLite consensus disorder prediction 223 242 - -
Adu09g01098 735 MobiDBLite consensus disorder prediction 400 467 - -
Adu09g01098 735 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 456 520 IPR036638 GO:0046983
Adu09g01098 735 MobiDBLite consensus disorder prediction 48 85 - -
Adu09g01098 735 PANTHER TRANSCRIPTION FACTOR PIF3 1 674 - -
Adu09g01098 735 MobiDBLite consensus disorder prediction 700 735 - -
Adu09g01098 735 Pfam Helix-loop-helix DNA-binding domain 463 509 IPR011598 GO:0046983
Adu09g01098 735 MobiDBLite consensus disorder prediction 168 198 - -
Adu09g01098 735 MobiDBLite consensus disorder prediction 414 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01098 Adu-Chr9 21125608 21131360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01098 1 605 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 35.152 3.22e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Adu09g01098 HLH 8.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01098 K12126 - gmx:100794974 862.448