Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01089 ATGGGAAGGCACTCTTGCTGCTACAAGCAGAAGCTAAGAAAGGGACTCTGGTCCCCAGAGGAAGATGAGAAGCTTCTCAATTATATCACCAACCATGGTCATGGATGTTGGAGCTCTGTCCCCAAACTAGCAGGATTGCAGAGATGTGGGAAGAGCTGCAGATTAAGATGGATAAATTACCTGAGGCCAGATTTGAAGAGAGGAGCATTCTCACAGGAGGAAGAGGATTTGATAATTGAACTCCATGCAGTTCTTGGAAACCGGTGGTCTCAGATTGCAGCACGGTTACCGGGAAGAACCGACAATGAGATAAAGAATCTATGGAACTCTTGCCTCAAGAAGAAGCTGAGGCAGAAAGGGATTGACCCAATCACAAACAAGCCACTCTCCGATGTGGTGCCTATTGAGAATAACAAGAACAAGAAGGAGGAGGAGGAGAAGCCACCAACAACAACAGAAAGGTTTGAAGGGCCTCCTTCTGATTCTGTAGGAGGATACTTTTCCTTCAATTATCAGCAAATGATGAACAATTTTGGAGCAACTCCACCAAACGCCACATCGAGTGACGCTAACTTTGTTGCTAACAACATTCTAACATGGGAACAAGAAGAGGTAAAATGGTGTGAGTATCTTAACACCCTTCTTCTCAACAACACGGTAGTTCAGAATCATTCTTCTTCTTCTTCTCATTCTGTTATGTATGGTGGTGGTGGTGGTGAGGTTATTACTGAGCCAGAAACAACAAGCTTCATGAGACAAGACTCATCAAGTAGTAGTTGGCACCACCATAGCCAGCAACAACCTCATCAATTCTCAGATATGTATACCAAGGATCTGCAGAGATTTTCAGTGGCTTTTGGCCAATCCATGTAG 873 0.4433 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCLKKKLRQKGIDPITNKPLSDVVPIENNKNKKEEEEKPPTTTERFEGPPSDSVGGYFSFNYQQMMNNFGATPPNATSSDANFVANNILTWEQEEVKWCEYLNTLLLNNTVVQNHSSSSSHSVMYGGGGGEVITEPETTSFMRQDSSSSSWHHHSQQQPHQFSDMYTKDLQRFSVAFGQSM 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01089 290 MobiDBLite consensus disorder prediction 249 270 - -
Adu09g01089 290 SMART sant 66 114 IPR001005 -
Adu09g01089 290 SMART sant 13 63 IPR001005 -
Adu09g01089 290 PANTHER MYB DOMAIN PROTEIN 55 1 148 - -
Adu09g01089 290 PANTHER MYB DOMAIN PROTEIN 55 183 283 - -
Adu09g01089 290 Gene3D - 69 151 - -
Adu09g01089 290 MobiDBLite consensus disorder prediction 136 152 - -
Adu09g01089 290 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Adu09g01089 290 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu09g01089 290 CDD SANT 17 61 IPR001005 -
Adu09g01089 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu09g01089 290 Gene3D - 11 67 - -
Adu09g01089 290 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu09g01089 290 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu09g01089 290 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu09g01089 290 PANTHER HOMEODOMAIN-RELATED 183 283 - -
Adu09g01089 290 PANTHER HOMEODOMAIN-RELATED 1 148 - -
Adu09g01089 290 CDD SANT 69 109 IPR001005 -
Adu09g01089 290 MobiDBLite consensus disorder prediction 127 159 - -
Adu09g01089 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01089 Adu-Chr9 20944798 20946427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01089 1 287 MYB Transcription Factor Family AT1G57560 50.654 3.94e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g01089 Myb_DNA-binding 5.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01089 K09422 - qsu:112017656 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00509 06 5996976 5998071 Adu09g01089 09 20944798 20946427 PCT