Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01056 ATGAGAAGGCACTCTTGCTGTTACAATCAGAAGCTTCGAAAGGGTCTGTGGTCACCTGAGGAGGATGAGAAACTTCTCATGCATATTACTAAGTATGGTCATGGATGTTGGAGCTCTGTGCCTAAGCAAGCAGGTTTGCAAAGGTGTGGTAAGAGCTGCAGACTTAGGTGGATAAATTACTTAAGGCCTGATTTGAAGAGAGGTACATTCTCACAAGAAGAAGAGAATCTCATCATTGAGCTTCATGGAGTATTGGGCAATAGATGGTCGCAAATTGCGGCACAATTGCCAGGGAGGACCGACAATGAGATAAAGAATCTGTGGAATTCTTGCTTGAAGAAGAAGCTGAGGCAGAGAGGTATAGACCCTGTGACACACAAGAAGATTCCGGAGGCCGAGAACGGCAGCGAGGACAACGACAACAGAAACCAAGAAAAGGCAGCAGAAGCATCGTCCAATGAGTTGAACAAATCAGATGATGCAACCCCCTATGTGCTAAACAGAGCATCTTCAATGAGTTGCCATCATCACTCAGATTTCATGAGTGGTTTTCCAATTCAGATGATAAATCATGCATCATCATCATCAGATTCAAATTCAGTTAATTGGTATAGCCACAGTAGTGGAAGGCCTTTTGATATCAACACTGATTTTCCATTCAATACCACTTCTATTCTTACACCAACAACCGCAACCGCAACCAATTTATTTCTTCCTACTGATTCTAGTTTCCTTTACAAGCCTTCTTTTTCTTCTTCTTCTTCCAACTCTCCTGAAAATATCTCTAATACTACACCCTATGGATTGAAAGAGGAACAATACCAAATTCACATGAGCATAGAAGAGTTAGAAGAATTATCATCCAAATGGGATGAGTATTATTACTACCTTCATAACCCAGTCTCAATGCCTGCTTCTTCTGAATCATTTTGCAATGAAATGAAGCCAGATATACACTATTTGATACCTGATACACCAGGTCCCATTATGTTACCTCACCATAATAATAATAATACCAAGTTCCAAGAACCATCTCAAATGGCTAGTTTCTTTTCAAAGGACATTCAGAAGCTCACAGCAGCATTTGGACATATATAA 1098 0.4044 MRRHSCCYNQKLRKGLWSPEEDEKLLMHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIIELHGVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKKIPEAENGSEDNDNRNQEKAAEASSNELNKSDDATPYVLNRASSMSCHHHSDFMSGFPIQMINHASSSSDSNSVNWYSHSSGRPFDINTDFPFNTTSILTPTTATATNLFLPTDSSFLYKPSFSSSSSNSPENISNTTPYGLKEEQYQIHMSIEELEELSSKWDEYYYYLHNPVSMPASSESFCNEMKPDIHYLIPDTPGPIMLPHHNNNNTKFQEPSQMASFFSKDIQKLTAAFGHI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01056 365 PANTHER HOMEODOMAIN-RELATED 1 264 - -
Adu09g01056 365 Gene3D - 14 66 - -
Adu09g01056 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu09g01056 365 Gene3D - 68 154 - -
Adu09g01056 365 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu09g01056 365 CDD SANT 17 61 IPR001005 -
Adu09g01056 365 MobiDBLite consensus disorder prediction 122 147 - -
Adu09g01056 365 SMART sant 66 114 IPR001005 -
Adu09g01056 365 SMART sant 13 63 IPR001005 -
Adu09g01056 365 MobiDBLite consensus disorder prediction 122 160 - -
Adu09g01056 365 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu09g01056 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu09g01056 365 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Adu09g01056 365 CDD SANT 69 109 IPR001005 -
Adu09g01056 365 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu09g01056 365 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu09g01056 365 PANTHER MYB DOMAIN PROTEIN 55 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01056 Adu-Chr9 19880959 19883023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01056 1 138 MYB Transcription Factor Family AT4G01680 89.130 1.99e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g01056 Myb_DNA-binding 5.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01056 K09422 - gmx:100782199 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00531 06 6380449 6382214 Adu09g01056 09 19880959 19883023 PCT