Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu09g01023 | ATGGCAAGTTTATTTTTAAAGAGTCCCATCTCCAAAAATGTTCTCGACTTGAAGAAGTTTGGTGTCAAAGGTTGCTGGATGTCTTCCTGCCTCCAACTTGGAGTCTTGGAGAAAGAGTTCTGGAAAGAAGTTGCTTGTGGAAAAATGGAAACAGTTCAATATGCATGTGATGTTGATGCAGTGCCTTCTCATCTCCTTCTGATAAGCTTGGTAGCAAAACTTTTTCGGTTGCCAAAATCTGCATGGCGGCTCTTGGAATCATCTATTCCAATAAAATTAATTATCATCACTGTGGGGTATCAAAATGATATTCTAGGTCATGCAGCATTGGACTTTGAAAGGGTGGTGAGAGAACATGTGTATATACTAATGATATTTTGCCAAGTGATGGAGAAAATGGAGCCTTTGATGTTTTTTTGGGGGAAAACAATTCTATTTTCGTCAAATAGTGTGTTGGAACATGAAGTCCCCATTTACAAGGCTGTTCAAAAGCTAGGGGAGTTTGTGATTACCTTCGCTAAGGCAGACCATGTTGGATTCAGTCATGATTAA | 552 | 0.3931 | MASLFLKSPISKNVLDLKKFGVKGCWMSSCLQLGVLEKEFWKEVACGKMETVQYACDVDAVPSHLLLISLVAKLFRLPKSAWRLLESSIPIKLIIITVGYQNDILGHAALDFERVVREHVYILMIFCQVMEKMEPLMFFWGKTILFSSNSVLEHEVPIYKAVQKLGEFVITFAKADHVGFSHD | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu09g01023 | 183 | Gene3D | Cupin | 104 | 183 | - | - | |
Adu09g01023 | 183 | PANTHER | TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN | 104 | 182 | - | - | |
Adu09g01023 | 183 | PANTHER | TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN | 27 | 90 | - | - | |
Adu09g01023 | 183 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 104 | 182 | - | - | |
Adu09g01023 | 183 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 27 | 90 | - | - | |
Adu09g01023 | 183 | Pfam | JmjC domain, hydroxylase | 142 | 182 | IPR003347 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu09g01023 | Adu-Chr9 | 18877304 | 18883514 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu09g01023 | 109 | 182 | C2H2 Transcription Factor Family | AT5G04240 | 39.189 | 3.36e-09 | 53.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Jumonji | Adu09g01023 | JmjC | 8.1e-08 | CL0029 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu09g01023 | - | - | gsj:114408462 | 136.732 |