Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01023 ATGGCAAGTTTATTTTTAAAGAGTCCCATCTCCAAAAATGTTCTCGACTTGAAGAAGTTTGGTGTCAAAGGTTGCTGGATGTCTTCCTGCCTCCAACTTGGAGTCTTGGAGAAAGAGTTCTGGAAAGAAGTTGCTTGTGGAAAAATGGAAACAGTTCAATATGCATGTGATGTTGATGCAGTGCCTTCTCATCTCCTTCTGATAAGCTTGGTAGCAAAACTTTTTCGGTTGCCAAAATCTGCATGGCGGCTCTTGGAATCATCTATTCCAATAAAATTAATTATCATCACTGTGGGGTATCAAAATGATATTCTAGGTCATGCAGCATTGGACTTTGAAAGGGTGGTGAGAGAACATGTGTATATACTAATGATATTTTGCCAAGTGATGGAGAAAATGGAGCCTTTGATGTTTTTTTGGGGGAAAACAATTCTATTTTCGTCAAATAGTGTGTTGGAACATGAAGTCCCCATTTACAAGGCTGTTCAAAAGCTAGGGGAGTTTGTGATTACCTTCGCTAAGGCAGACCATGTTGGATTCAGTCATGATTAA 552 0.3931 MASLFLKSPISKNVLDLKKFGVKGCWMSSCLQLGVLEKEFWKEVACGKMETVQYACDVDAVPSHLLLISLVAKLFRLPKSAWRLLESSIPIKLIIITVGYQNDILGHAALDFERVVREHVYILMIFCQVMEKMEPLMFFWGKTILFSSNSVLEHEVPIYKAVQKLGEFVITFAKADHVGFSHD 183
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01023 183 Gene3D Cupin 104 183 - -
Adu09g01023 183 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 104 182 - -
Adu09g01023 183 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 27 90 - -
Adu09g01023 183 PANTHER LYSINE-SPECIFIC DEMETHYLASE 104 182 - -
Adu09g01023 183 PANTHER LYSINE-SPECIFIC DEMETHYLASE 27 90 - -
Adu09g01023 183 Pfam JmjC domain, hydroxylase 142 182 IPR003347 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu09g01023 Adu-Chr9 18877304 18883514 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01023 109 182 C2H2 Transcription Factor Family AT5G04240 39.189 3.36e-09 53.5
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Adu09g01023 JmjC 8.1e-08 CL0029
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01023 - - gsj:114408462 136.732