Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01017 ATGGCAAACGGCAAAGTCGTTGTTTCTGCCGTTTCTATCATCCTTGTGGTTGGTGTTGTCATTGGCACCGTTGCAGTTGTTAGCAACAACAACAGCAGCCATGACCAATTGAAATCCCACAACAAGGCAGTCGAGAAGTTGTGCCAAAACGCAGATGACAAGAAACTTTGCTATGACGTCATTGGCAACGTCAATACCACTGACCCAAAGGATTACGTCTCAGAAGTGGTGAAGAGAACATTGGATACCGTCATCAAGGCATTCAACATGACCGATAGCCTCTCTGTGGAGCATGGCGAGAGTAATCCTGGCATGAAGATGGCCCTTGATGATTGCAAGGACTTGTTGCAATCAGCAACCCACGAACTCGAGGCCTCTATCAACCTTATCACTGACAACAATTTTGCAAATGTTTACCAGAGTTCCGCTGAACTCAAGAATTGGTTGGGTGCCGTTATTGCCTACCAGCAATCCTGCATGGACGGCTTTGACACCGACGGTGAAAAGAAAGTCAAAACCGAGTTGCAAGCTGATAGCTTGGATAGCGTTGGCCAGCTCACTGCACTTGCTCTTGATGTTGTTTCCGGATTGTCCCACTTCCTTAATGGTCTTGGTTTGAACTTGAACCTCAAACCTGCTTCTAGAAAGCTCCTTGAGGTGGATCATGAGGGATACCCCACTTGGTTATCTGCCGCAGATCGCAAACTCTTGCAAGACGTCAATAATGTCAGACCTAATGTTGTTGTTGCCAAGGACGGTAGTGGCCAATTTAAGACCGTTTTGGAGGCTATTAACTCTTACCCTAAGAACTACACAGGTAGATACATTATCTATGTTAAGGCTGGCGTTTATGATGAATACATTACCGTTGACAAGAAGTTCAAGAACTTGTTCATCTATGGCGATGGAAATACAAAGACCATCATCACCGGTCGCAAGAACTTCCATGAGGGTACTAAGACCATGAGAACATCCACATTCTCCACCAATGCTGATGATTTCATTGCCAAGTCAATTGCATTCGAGAATACCGCTGGTGCTGAAGGTCACCAGGCAGTGGCACTCCGTGTGCAGGGAGATCGCTCAGCCTTCTTTGATTGCGCAATGCGTGGTTACCAAGATACACTTTATGCCCACGCCCATCGTCAGTTCTACCGCAACTGCGAAATCTCTGGTACCATCGACTTCATCTTCGGCTATGGCACCACCTTGATCCAAAACTCTAGGATCATTGTGAGGAAGCCCATGTCAAACCAGCAGAACATTGTGGTCGCTGATGGAACTGACCAGAAGAACATGCCTACTGGTATTGTCCTCCAAAATTGTGAGATCATGGCTGATTCCACCCTCTACCCAGACAGGTTGACAGTGAGGACATTCTTGGCAAGGCCATGGAAGGCATTCTCAAGGGCAGTGTTCATTGAGAATACCATTGGTGATTTGATCCAGCCACAAGGTTACATCCCATGGAACCCACCAACTGAGGCTAACACTGACAATTGTTACTTTGTTGAGTATGGAAACACTGGAGCTGGTGCCAATGCCGGAGCCAGGGCTCCATTTGCAAAAGGCATTATTAGTAAGGATGAAGCTTCTCAATTTCTTGCTGAGCCATGGATCCAAGCTAGCACTTGGGTCCCAGCCACTGGCATTTCATTCGATGCTGGTTTCACCAAG 1677 0.4693 MANGKVVVSAVSIILVVGVVIGTVAVVSNNNSSHDQLKSHNKAVEKLCQNADDKKLCYDVIGNVNTTDPKDYVSEVVKRTLDTVIKAFNMTDSLSVEHGESNPGMKMALDDCKDLLQSATHELEASINLITDNNFANVYQSSAELKNWLGAVIAYQQSCMDGFDTDGEKKVKTELQADSLDSVGQLTALALDVVSGLSHFLNGLGLNLNLKPASRKLLEVDHEGYPTWLSAADRKLLQDVNNVRPNVVVAKDGSGQFKTVLEAINSYPKNYTGRYIIYVKAGVYDEYITVDKKFKNLFIYGDGNTKTIITGRKNFHEGTKTMRTSTFSTNADDFIAKSIAFENTAGAEGHQAVALRVQGDRSAFFDCAMRGYQDTLYAHAHRQFYRNCEISGTIDFIFGYGTTLIQNSRIIVRKPMSNQQNIVVADGTDQKNMPTGIVLQNCEIMADSTLYPDRLTVRTFLARPWKAFSRAVFIENTIGDLIQPQGYIPWNPPTEANTDNCYFVEYGNTGAGANAGARAPFAKGIISKDEASQFLAEPWIQASTWVPATGISFDAGFTK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01017 559 Gene3D - 240 557 IPR012334 -
Adu09g01017 559 Pfam Pectinesterase 246 542 IPR000070 GO:0030599|GO:0042545
Adu09g01017 559 Pfam Plant invertase/pectin methylesterase inhibitor 43 192 IPR006501 GO:0004857
Adu09g01017 559 SMART PMEI_2 39 193 IPR006501 GO:0004857
Adu09g01017 559 CDD PMEI-like_3 47 198 - -
Adu09g01017 559 PANTHER PECTINESTERASE 5 557 - -
Adu09g01017 559 ProSitePatterns Pectinesterase signature 2. 390 399 IPR033131 -
Adu09g01017 559 SUPERFAMILY Pectin lyase-like 244 555 IPR011050 -
Adu09g01017 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 194 IPR035513 -
Adu09g01017 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 198 IPR035513 -
Adu09g01017 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 179 IPR006501 GO:0004857
Adu09g01017 559 PANTHER PECTINESTERASE 5 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01017 Adu-Chr9 18688128 18689940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01017 4 557 Carbohydrate Esterase AT2G47030 39.496 3.59e-133 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01017 K01051 - gmx:100808559 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01017 09 18688128 18689940 Adu06g00553 06 6595553 6597688 PCT