Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01015 ATGGAAAAGACAAAGGTTGCTTCTGCAGTTTCTCTCCTTCTAGTGGTGGGTGTTGCAGTGGGTGTTGTTGCCATTGTCCGCACCAACGACGAGAAAGTCACCGGCACAACCGGTAACGACGGCGGATTAATAAGCACCCATAGCAAGGCCGTTAAGGCCATGTGCCAAAACTCCGACGACCGAAGACTATGCCTAGACACACTGAATCCTGTAAACCACACGGATCCAAAAGAGTACATATCAACGGTTGTAAAGAGATCGTTGGAAAGCGTCATCAAGGCCTTTAACATGAGCGATACGCTCAGATTGGAGCACGGTAACAGCACCCCGGGGGTCAAAATGGCCCTCGAGGACTGTAGAGACCTGCTCCAATTCGCCATTGGGGAGTTACAAGCAACAAAAACAGTCCTTCAGGACAACACAATAAATCATGTGCATGATCGCGTCGCCGACCTCAAGAATTGGTTAGGGGCTGTTTTCGCCTTCCAACAATCGTGCCTGGACGGGTTCCACACCCACCGCGAGAAGCAGGTTCGGTCGCAGTTGCAAACCGGAAGCTTGGATCACGTTGGGAAGGTTACGGCGTTGGCTCTTGACGTTGTGTCTCGGATTGCACATGTGCTGTCAAATTTTGACTTACACCTTATCGTTAAGCCTTCTTCACGGCGTTTAATTGAGGTTGATCAAGATGGTTACCCGGCTTGGTTCGGCGTTACGGATCGGAAGCTCTTGGGTGACGTCAGCAAGGGAGGTTCCATTGCGCCCAATGCAGTTGTTGCTAAAGATGGGAGCGGGCAATTTAAGACTGTTTTGGATGCCATTAATGCGTACCCTAAAAACAATAAGGGGAGATATGTTATCTATGTTAAGGCTGGCATATATGATGAGTATATTACTGTGGATAAGAACAAGAAAAATATTTTGATGTATGGAGATGGCCACACCAAAACTATTATTACTGGTAATAAAAATTTTGTTGATGGCTGGAAGACAATGAGAACTGCTACCTTTGCGACAGTTGCTGAAGATTTCATTGCGAAGTCAATTGCATTCGAGAACACAGCCGGTGCAAGCAAACATCAAGCAGTGGCACTTCGCGTGCAAGGCGACCGCTCAGCTTTCTTCGACTGCGCCATTCGTGGCTTCCAGGACACGCTATATGCTCACGCCCACCGCCAGTTCTATCGCAACTGTGAAATCTCCGGCACCGTCGACTTCATCTTCGGTTACTCCTCAACCATAGTCCAAAGCTCCAAGATCATCGTCCGAAAACCCGACCCAAACCAACAAAACATCGTGGTTGCAGATGGAACACCTCAGAAGAACATGCCCACAGGGGTAGTGCTACAAAACTGCGACATTTCACCAGAGGCTGAACTGGTTCCTATGAAACTAACGGTGAAGTCATATCTGGCGAGGCCATGGAAGGAGTATTCAAGGGCAATCTTCTTGGAGAACACAATTGGTGACTTGATTCAACCGGATGGGTATCTTCAGTGGTCAGGGAACATGTACCTAAACACTTGCTTCTTTGCTGAGTATGGAAACACCGGACCTGGGGCTAACGTTAATGCCAGAGTGAAGTGGGGTCGTGGGGTTCTTAATAAGAACGATGCTGCTCAGTACACTGCTGAGCACTGGATTCAAGCTAGTACATGGTTGCCAGCTACTAGTATACCCTTTGATCCTGCCTTCACTAGAGGATAA 1707 0.4827 MEKTKVASAVSLLLVVGVAVGVVAIVRTNDEKVTGTTGNDGGLISTHSKAVKAMCQNSDDRRLCLDTLNPVNHTDPKEYISTVVKRSLESVIKAFNMSDTLRLEHGNSTPGVKMALEDCRDLLQFAIGELQATKTVLQDNTINHVHDRVADLKNWLGAVFAFQQSCLDGFHTHREKQVRSQLQTGSLDHVGKVTALALDVVSRIAHVLSNFDLHLIVKPSSRRLIEVDQDGYPAWFGVTDRKLLGDVSKGGSIAPNAVVAKDGSGQFKTVLDAINAYPKNNKGRYVIYVKAGIYDEYITVDKNKKNILMYGDGHTKTIITGNKNFVDGWKTMRTATFATVAEDFIAKSIAFENTAGASKHQAVALRVQGDRSAFFDCAIRGFQDTLYAHAHRQFYRNCEISGTVDFIFGYSSTIVQSSKIIVRKPDPNQQNIVVADGTPQKNMPTGVVLQNCDISPEAELVPMKLTVKSYLARPWKEYSRAIFLENTIGDLIQPDGYLQWSGNMYLNTCFFAEYGNTGPGANVNARVKWGRGVLNKNDAAQYTAEHWIQASTWLPATSIPFDPAFTRG 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01015 568 Pfam Pectinesterase 256 550 IPR000070 GO:0030599|GO:0042545
Adu09g01015 568 Gene3D - 250 565 IPR012334 -
Adu09g01015 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 205 IPR035513 -
Adu09g01015 568 CDD PMEI-like_3 53 205 - -
Adu09g01015 568 PANTHER PECTINESTERASE 3 562 - -
Adu09g01015 568 SUPERFAMILY Pectin lyase-like 253 561 IPR011050 -
Adu09g01015 568 PANTHER PECTINESTERASE 3 562 - -
Adu09g01015 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 202 IPR035513 -
Adu09g01015 568 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Adu09g01015 568 Pfam Plant invertase/pectin methylesterase inhibitor 50 198 IPR006501 GO:0004857
Adu09g01015 568 SMART PMEI_2 46 200 IPR006501 GO:0004857
Adu09g01015 568 TIGRFAM PME_inhib: pectinesterase inhibitor domain 46 180 IPR006501 GO:0004857
Adu09g01015 568 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01015 Adu-Chr9 18622143 18625537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01015 6 568 Carbohydrate Esterase AT3G05610 38.004 4.97e-134 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01015 K01051 - gmx:100820142 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00553 06 6595553 6597688 Adu09g01015 09 18622143 18625537 PCT