Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00991 ATGGAGATGGAGTACACAAGCAGTGTTCACATGATCATGAGAAGTTTATCGGATTGTGGCTCTTCGGTAGCAAATGGGAGCGAGGAAGACATGGAAATTAGAAAAGGTCCATGGACAGAGGAAGAGGATTCTGCTCTGTTGAACCATATCACCACCTATGGTGAAGGACACTGGAACTCTGTTGCACGCTCTGCAGGTCTAAAACGAAGCGGGAAAAGCTGCAGATTAAGATGGTTAAATTACTTGCGTCCGAATGTTAGACGTGGGAACATCACCCTCGAAGAACAACTCTTGATTCTTGACCTCCATTCGCGATGGGGCAATAGGTGGTCGAAAATAGCCGAACAATTGCCTGGAAGAACAGACAACGAGATCAAGAACTACTGGAGAACGAGAGTGGTGAAGCAGGCGAAGCAACTAAAATGCGACGTCAACAGCAAACAGTTCAGAGACGCGTTGCGCTACGTATGGATGCCGCGCCTTATGGAGCAGATTCAAGCACAAGGAAGATCCACCATGTGCGTCTCCCAAGCTCGCGAGATAGTTAATCCTGTCACTTCAGTTTCGACGGCTTCGTCTAAATCTTGCTCTTCATTCTCAGGATGTGAACAATTCCAAGCCTCTTCTTCAGTCTCTGATTCTTGTGTGTCTTATTACAGTTTAATGGGTAGTGGAAGTGGTGCTGGTTCTTCAGAGCGTGTGGAAAAGGGAGCCACGTCATCATCCACGCCATTTGAACCGGAAAATGGTTTCGGGGGTGCTGATTTTTGGACTGATGAAAACATATGGTTCTTGCAGCAGCAACTTGCTGATGACGATCATCTTTGA 828 0.4686 MEMEYTSSVHMIMRSLSDCGSSVANGSEEDMEIRKGPWTEEEDSALLNHITTYGEGHWNSVARSAGLKRSGKSCRLRWLNYLRPNVRRGNITLEEQLLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDALRYVWMPRLMEQIQAQGRSTMCVSQAREIVNPVTSVSTASSKSCSSFSGCEQFQASSSVSDSCVSYYSLMGSGSGAGSSERVEKGATSSSTPFEPENGFGGADFWTDENIWFLQQQLADDDHL 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00991 275 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 22 266 IPR044676 GO:0003700|GO:0006355|GO:0043565
Adu09g00991 275 SMART sant 87 135 IPR001005 -
Adu09g00991 275 SMART sant 34 84 IPR001005 -
Adu09g00991 275 MobiDBLite consensus disorder prediction 224 247 - -
Adu09g00991 275 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Adu09g00991 275 Gene3D - 35 87 - -
Adu09g00991 275 PANTHER MYB TRANSCRIPTION FACTOR-RELATED 22 266 - -
Adu09g00991 275 CDD SANT 92 131 IPR001005 -
Adu09g00991 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 137 IPR017930 -
Adu09g00991 275 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Adu09g00991 275 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Adu09g00991 275 MobiDBLite consensus disorder prediction 224 250 - -
Adu09g00991 275 Gene3D - 92 172 - -
Adu09g00991 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 86 IPR017930 -
Adu09g00991 275 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Adu09g00991 275 SUPERFAMILY Homeodomain-like 32 129 IPR009057 -
Adu09g00991 275 CDD SANT 37 82 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu09g00991 Adu-Chr9 17730069 17731473 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00991 28 272 MYB Transcription Factor Family AT2G47190 52.140 4.62e-86 256
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g00991 Myb_DNA-binding 9.6e-15 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00991 K09422 - gmx:100777932 315.464
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00579 06 6942212 6943769 Adu09g00991 09 17730069 17731473 PCT