Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00990 ATGATGATCACTGTGTTCCTTCTTTCATCTTTATGCATCGCTTTGGGAACCAAATTAAAAGTTGTTGGAGGTAGTGGTCCGGATTTAAGGCTTAGAGATGCTGAGAGTAACAAAGTTAGAATAACGGTAAGTCAAGACGGTGCTGGTGACTTCAAGACCGTTACAGAAGCTGTTAATAGCATCCCTCAATGGAACAATAGGAGATTCATTCTGTACATTGCACCAGGTATTTATAGGGAGAAGATAATGATCCCAAGAACGCTTCCTTTTGTTACATTCTTAGGAGATGCTAGTGATCCACCAACAATTACAGGGAATGATACAGCTTCTATCGTTGGAAGAAATGGAAAACCAATTGGCACTTTCCAGAGTGCAACAGTTGCCGTCGACGCTAACTATTTTCTTGCCATCAACATCAAATTTGAGAACACAGCTGCACACTGGATTGGAAGGAGAGGGGAACAAGGAGTGGCGCTTCGAATTTCAGGGACCAAAGCTGCATTTTACAATTGCACATTCTATGGCGCTCAGGACACACTATATGATCACAAAGGCCTTCATTACTTCAACAATTGCCTCATTCAAGGTTCTGTTGATTTCATCTTCGGCTCTGGCAGGTCCCTTTACGAGAACTGCTATCTAAATTCCACAACAAGGAAGGTGGCTTCCATCACAGCTCAAAAGCGAACAAATTCATCAATGGAGAGTGGATTTTCGTTCAAAAACTGCACAGTCACAGGGAGTGGCCAAGTTTTTCTTGGACGAGCATGGGGCGAGTATTCAACGGTTGTTTTCTCTTACACCTTCATGGACAAAATTGTCCTTTCACAAGGATGGAGTGACTGGGGTGATCAAAAGCGCGACTTGAGAGTATATTATGGAGAATACAAGTGTAGTGGCCCTGGGGCTAATTTGACTGGAAGAGTTCCATGGGCAAGGATGCTTACAGATGAAGAGGCCAAGCCCTTCACTGGAATTCAATTTATTGAAGGAGATTCTTGGCTCATCAGCCCCTGA 1017 0.4346 MMITVFLLSSLCIALGTKLKVVGGSGPDLRLRDAESNKVRITVSQDGAGDFKTVTEAVNSIPQWNNRRFILYIAPGIYREKIMIPRTLPFVTFLGDASDPPTITGNDTASIVGRNGKPIGTFQSATVAVDANYFLAINIKFENTAAHWIGRRGEQGVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCLIQGSVDFIFGSGRSLYENCYLNSTTRKVASITAQKRTNSSMESGFSFKNCTVTGSGQVFLGRAWGEYSTVVFSYTFMDKIVLSQGWSDWGDQKRDLRVYYGEYKCSGPGANLTGRVPWARMLTDEEAKPFTGIQFIEGDSWLISP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00990 338 SUPERFAMILY Pectin lyase-like 39 335 IPR011050 -
Adu09g00990 338 ProSitePatterns Pectinesterase signature 2. 194 203 IPR033131 -
Adu09g00990 338 PANTHER PECTINESTERASE 25 336 - -
Adu09g00990 338 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 336 - -
Adu09g00990 338 Gene3D - 35 337 IPR012334 -
Adu09g00990 338 Pfam Pectinesterase 41 332 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00990 Adu-Chr9 17641633 17659165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00990 41 335 Carbohydrate Esterase AT5G47500 48.148 1.88e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00990 K01051 - qsu:112011696 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00990 09 17641633 17659165 Adu09g00990 09 17641633 17659165 ECH