Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00988 atgctcttgctaaagcatgACAAGAACAAGAAGCTGGAGTTCATTGCTTCGAGCTTTCCCCTACCATGCTCGTACAACACCTGCTTGCCGATAGCTCCGGCGAACAGAACAGTGACCAGAGCGAACGGTGGAGAAGCGACAACTCCGGTGAGCAGCATGGTGGAGCAACCTCATTGGTCTTCTGCAATGGATGCCAAAGACATCTTGGGATTGCCTAAAAATTCGTTCCCTCCTCAGGAGAAGAAGTCTCGACCTCCCAAAGAGTCTCAGAGAAAACCCGATGGGATTTCCCGTGAGGTTTATGCGCTTACGGGTGGATTGGCACCACTTATGCCTGCTGTTGATTCTTCTCAATTGAAAAGAAGGCATCCGCCAGACGAAAAGGTCGCTTGGCAGTGGCTTGGTTTCACCAGTTCTGCTCGTAAAGATAATCTTCATCTTTATCATTGGGTCCGAGTTTCTGTTGACATTACAAGATACACAGATGAGGAATATGAGAAGTATTTGACAGATCCTAGGTGGACCAAGGAAGAGACAGATCAGCTGTTTGACTTGTGCGAACAATTTGATCTCCGATTCATTGTCATAGCTGATAGGTTCCCATCATCTCGGACTCTAGAAGAATTGAAGGATCGATATTATAGCGTATCACGGGCTTTATTAATTGCTAGGAATCCATCTTCTGTGGATATTGCAGCACATCCTCTTGTTAAGGAACCATATAATATTTCACGTGACGTGGAGAGGAAACGAGCAATGTCCCTGGTCCTCTCTCAAACAAGGCAACAAGAGCAAAGAGATGAAGAGGTTCTTGCTGAAGCAAAAAGAATAGCTCAGTCACGCATACCTGCTAAGGTTTCTCAAGAATCTGAGATGGCTGTTGCTCCAAATGCTGGTGTAGAAGTTACTGAGAGGACTATCCCGGGTGATACTGTGTCTCCACCTCCATCGAATGCGCAACATCCATTGATACCTGTGCCGCCTCCATTGTCAACCGAGAATGCATCAACTCTGGCTTCTCTTCGCATTCTTCGTTTATATCTGAGGACCTATGCACTTGAGCAAATGTTGCAAGCTGCAAGCTCAACTGCTGGATTGCGAACTATCAAACGGGTTGAACAAACTTTGCAAGACCTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCCGTTTGTGCTGAACATCTTGAACTAAGGAAAGAAATACTAACTTTGTTGAATCTTCAAAAGCAGCTGCAATATAAGGAGGCTGAAGGTTTGCCTTTTCGTGAAGGGTCCTTCACTGAAACACCAGGAACACCAAAGGATAGAACATTTGTTCCTGACTCAAGTTTTGGAGTGGAGAGGACTGGCAAAAGGGACCAAAAGCGCAAGGCACCTGGACGGCTTTCAGAAGCACCATCATCGCCAGCCCAGTCTAAAAGACCCAGAAAATTAAAGGCCTCTGATTTTTAG 1458 0.4527 MLLLKHDKNKKLEFIASSFPLPCSYNTCLPIAPANRTVTRANGGEATTPVSSMVEQPHWSSAMDAKDILGLPKNSFPPQEKKSRPPKESQRKPDGISREVYALTGGLAPLMPAVDSSQLKRRHPPDEKVAWQWLGFTSSARKDNLHLYHWVRVSVDITRYTDEEYEKYLTDPRWTKEETDQLFDLCEQFDLRFIVIADRFPSSRTLEELKDRYYSVSRALLIARNPSSVDIAAHPLVKEPYNISRDVERKRAMSLVLSQTRQQEQRDEEVLAEAKRIAQSRIPAKVSQESEMAVAPNAGVEVTERTIPGDTVSPPPSNAQHPLIPVPPPLSTENASTLASLRILRLYLRTYALEQMLQAASSTAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGLPFREGSFTETPGTPKDRTFVPDSSFGVERTGKRDQKRKAPGRLSEAPSSPAQSKRPRKLKASDF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00988 485 PANTHER BNAA04G26950D PROTEIN 63 484 - -
Adu09g00988 485 MobiDBLite consensus disorder prediction 80 95 - -
Adu09g00988 485 Pfam SANT/Myb-like domain of DAMP1 153 220 IPR032563 -
Adu09g00988 485 MobiDBLite consensus disorder prediction 424 485 - -
Adu09g00988 485 SMART sant 170 219 IPR001005 -
Adu09g00988 485 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 63 484 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Adu09g00988 485 Gene3D - 145 230 - -
Adu09g00988 485 MobiDBLite consensus disorder prediction 70 95 - -
Adu09g00988 485 CDD SANT_DMAP1_like 174 216 - -
Adu09g00988 485 MobiDBLite consensus disorder prediction 448 462 - -
Adu09g00988 485 SUPERFAMILY Homeodomain-like 170 220 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00988 Adu-Chr9 17570013 17579707 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu09g00988 SANT_DAMP1_like 1.2e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00988 K11324 - qsu:112038673 632.484