Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00983 ATGGAGAAGGATAACATGGATTTGAAGAAGACTGAGGATGCTGTTGCTTTTGGATCCTCAAACGGTTATTATAATAATCCGTTGTTATTGTCGAGTGCGTTTGATTTCAGCTGTGAAGTGGAGAAAAGCTCGTTTATGGAGTTGCTGGGAGTGCAGGACTACTATAATAATAGTGGTGCTGTGCTTGATTTACCACAGTTATCAAAAGCTACAGTTCTTCCTTTTACCACGGTTAACGCTTCTTGTGACGATACTGCTAAAGAGTGTTCTGAAGTGTTGAACCAGAAGCACCAACCTGCAACTCCAAATTCGTCTTCGATTTCGTCCGCGTCGAGCGAAGCTGTCAACGATGAACACAATAAAATTGTAGAACAAGATGATGATGATAGTGAAGAAGATGAAGAAGAAGAAGAGCAGCTGAAAGAGACTAAGAAAGAGTTGAAGGCAAAGAAGACAAAGCAGAAGAGACAGAGAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGACGGTTACAGATGGAGAAAGTACGGTCAAAAGGCTGTCAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTAAAGAAGCGTGTGGAGCGGTCATTTACTGATCCAAGCGTTGTGGTAACTACCTATGAAGGCCAACACATACATCCAAGCCCAGTTATGCCTCGTTCAGCCATTGCCGGCGTTGGATCTCCGATGATACCGCCGGCTGTCTCCACTCCCAACTTGGGTCCTCTCATGCCTGGAAACTACATGTCACACTATCATCAGCATCGCCACCACCACCAACAACTACTAGTGAATACATTGTTCTCTTTGGGCATCCCTTACAACAATAGCAACAATATTGATAACTCTTCTTTTTCTCAAGACAATGGGCTTCTTCAAGATATTGTTCCTTCACACATGTTGAAAGAGAAGTAG 966 0.4369 MEKDNMDLKKTEDAVAFGSSNGYYNNPLLLSSAFDFSCEVEKSSFMELLGVQDYYNNSGAVLDLPQLSKATVLPFTTVNASCDDTAKECSEVLNQKHQPATPNSSSISSASSEAVNDEHNKIVEQDDDDSEEDEEEEEQLKETKKELKAKKTKQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHIHPSPVMPRSAIAGVGSPMIPPAVSTPNLGPLMPGNYMSHYHQHRHHHQQLLVNTLFSLGIPYNNSNNIDNSSFSQDNGLLQDIVPSHMLKEK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00983 321 SMART WRKY_cls 173 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu09g00983 321 SUPERFAMILY WRKY DNA-binding domain 165 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu09g00983 321 Pfam WRKY DNA -binding domain 174 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu09g00983 321 PIRSF WRKY_txn_fact_IIc 1 321 IPR017396 GO:0003700
Adu09g00983 321 MobiDBLite consensus disorder prediction 124 139 - -
Adu09g00983 321 PANTHER WRKY TRANSCRIPTION FACTOR 9 309 - -
Adu09g00983 321 Coils Coil 123 157 - -
Adu09g00983 321 ProSiteProfiles WRKY domain profile. 168 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu09g00983 321 Gene3D WRKY domain 158 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu09g00983 321 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 9 309 IPR044810 GO:0003700
Adu09g00983 321 MobiDBLite consensus disorder prediction 95 116 - -
Adu09g00983 321 MobiDBLite consensus disorder prediction 95 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00983 Adu-Chr9 17342950 17345118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00983 99 321 WRKY Transcription Factor Family AT2G47260 55.230 1.50e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu09g00983 WRKY 7.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00983 - - gmx:100784158 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00983 09 17342950 17345118 Adu09g00983 09 17342950 17345118 ECH
Adu06g00591 06 7117922 7118859 Adu09g00983 09 17342950 17345118 PCT