Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00948 ATGTTCTCCAACTCATCATCTTCATCTACTCTATATTATATCCAACATGTAGATCAAGATAATGGAGAACCCTATGGTGAACCTACAAAATACAATTTTTCGTCTATTAACACAAGTTGGATTTCTGAAGCTCTTCAATTTTCTTATTCATATGCATTCAGCAATGCCTCATCATTGCGAACCAATTGGAGCATTATTGTTGATAATGGCCACAACCCTTTGTTTCTCAACTCCGCAAGAGTCACAAGAACAAGTGTGATCTCTCTAGGGTTCTCGGAAACAACAGTAACTGATTTTCTCAGGGCTCAAAACAATGATCTTCATCAAAGTTCAATGAGCATGTCTTGGGCTACAAAAGATGGAAGGGCTATTGTACAAGGGATCCGAAATACTCGTTTGGTGATTTCTAATGATACAGTTTTGCTTCAATTATTGGACCAAAATGGAAACCCTAAAGGTGTTGGAGACACTGCTATACCATGCAACAATGAAAGATTTGGATCTAGTTTGAATATTCAGAATACGGAATATTTGATTCACTGCAGCACAATTGATGTCATGGGAATAGAATCGGTATATGTTGTGGCTATTCGAAAGAATGAATTACTTAGCTTTGACCAGCATTATAAGAAAAAAGGGTTGACTGTGTTGATTGTAATGATATTGATGATATTGATTGCTCTCGTGAGCTTTCTAAGCATGAATGCAAGAAATGCAAAGAGAGAAATGAGATTGCGTGCCTCACTCTTGAAACAAATGGAAGGCACCCAACAAGCTGAGAGAAAGAACATGAATAAAAGCCTTGCATTTGCTGCTGCCAATCATGATGTTAGGGCTTCTCTTGCGGGCCTTACTGCTCTGATAGACATGTCCTTTGACTTTGTTCAAAATGCGTCTGAATTGGACACCAACTTAAAACTAATGAAGGGTTGCACCCAAGACTTACTAGGGCTGCTGAATTCTATACTTGACACAAGCAAAATTGAGGCTGGAAAAATACAGCTTGAGGAAGAGGAATTTGATGTATCAATTCTGTTGGAAGATATAGTTGACTTATACCACCCTATGGCCTCAAAGAAAGGTGTGGATCTAATCTTGGACCCTTGTGATGGTTCTATTATTAGATACTCACGTGTCAAAGGAGACAGAGGAAGACTCAAACAAGTTTTGTGTAATCTTTTGAGCAATGCTGTTAAGTTTACTGATGAGGGGCACATAGTGGTTAGGGCAAGAGCTCAAAAGCCAAGCTTGCACAATTCATTAATGGCTGGTAATAGTGAAAAACATGGATTCATGGGACGTTTATCATGCTTATGTTTGAAGAAAATTAGCAGTGATGAAATTGAAGGCACGAGTAATTCAACACACGCAGATCCATATTGCGTTATGGATTTTATATTTGAAGTGGATGATACGGGAAAAGGAATCCCCAAAGAGAAGTACGAGTCTGTGTTTGAGAACTATATCCAAGTCAAAGAAACTTCCCTTGGAGTTGGAGGAACTGGCTTGGGACTTGGGATTGTGCAATCACTGGTGCGTTTGATGCATGGAGACATTGAAATTTCAGAGAAGGACGTGGGAGAAAAGGGAACATGCTTCAAGTTCAATGTTATCCTTAATGTATACGAGACAATCACGAATGCTGCTAGCACAAAAGAAGAAGAAGGTGTTGATGAAAGAAACCACACTCAGGCACCATTACCAACCCTTCAAAGTTGTAGCTCCGGTTCAAGCATTCGTTCCCTTAGTCCAAGATTCCGAATCCGCAGCTCCAGTCCCAAGCCAGAGCCTTCTCGTGTCATTATGCTAATCGCCGACGAGTATCGGCGGAAGGCCACAGAGAAGTTCATGGAGGGCTTAGGGATCAAAGTTGCCGCCGCGAAACGGTTGGAGGATCTATTTGATGTCTTGAAGAAGATGAAACAAAAGTGTCTGTATTCAAGCAGCCACAGTAGTGGTTCTCAAGGATCAGAGTATTTGAGTGCGAGCTCTCATTCCCGTTCCAGCAGAGTTAGAGTTGCATTGAGTTCTATGGATGGAAAGACGGATATTGGAGCAGCATCTAATGGCTTTATCCTTATTGTGGTTGAGACAGATGCAGGGCCACTTTTGGAGCTGTGTAAGATAGTTTCCAACTTCAAAAGAGGGCTTTGTAACCCTTGTCAAGTTGTTTGGTTAGATAAGAAGATTCTCTTTAAGAATCTTGATAAGGACACGATTGATCCCAAGGACATGGTTCTATCGAAACCGTTTCACGGTAGCCGTTTGTTCCAGGTTATAAAGCTTCTTCCTGAGTTCGGTGGATCCAAATTGAACACTCAGGAATCCTTTGTGGATCAATCTTCTGTAATACAAGAATGTGAGGATACAGAAAAGCCGTTGAGTGGTAAGAAAATTTTGGTGGTTGATGATACTCCATTGATGCGCATGATTGCTTTGCGTACTTTGATCAAGCTTGGAGCGATTATAGAGCAGTGTGAGAATGGAGAAGCAGCTGTGCATCTAGTTGGTGATGGTTTAATCAAGGATTTTCCTAATCCCCCTTACGATTACATCTTAATGGATTGCCAGATGCCAGTAATGAACGGGTTCGAGGCAACAAGGAAAATAAGAAAGATAGAGAAGAGGTATGGTAATATTCGCATTCCTATAATTGCATTAACAGCTGACAGTGACAAAATGACCATAGATGCTGGAATGGACTTTCACTTGGTAAAGCCTATCGACAGAAACAAATTTCTTGAAGCCATTCGAGACATCAATGCTAAAAAGCGCTCCATTTAA 2784 0.4066 MFSNSSSSSTLYYIQHVDQDNGEPYGEPTKYNFSSINTSWISEALQFSYSYAFSNASSLRTNWSIIVDNGHNPLFLNSARVTRTSVISLGFSETTVTDFLRAQNNDLHQSSMSMSWATKDGRAIVQGIRNTRLVISNDTVLLQLLDQNGNPKGVGDTAIPCNNERFGSSLNIQNTEYLIHCSTIDVMGIESVYVVAIRKNELLSFDQHYKKKGLTVLIVMILMILIALVSFLSMNARNAKREMRLRASLLKQMEGTQQAERKNMNKSLAFAAANHDVRASLAGLTALIDMSFDFVQNASELDTNLKLMKGCTQDLLGLLNSILDTSKIEAGKIQLEEEEFDVSILLEDIVDLYHPMASKKGVDLILDPCDGSIIRYSRVKGDRGRLKQVLCNLLSNAVKFTDEGHIVVRARAQKPSLHNSLMAGNSEKHGFMGRLSCLCLKKISSDEIEGTSNSTHADPYCVMDFIFEVDDTGKGIPKEKYESVFENYIQVKETSLGVGGTGLGLGIVQSLVRLMHGDIEISEKDVGEKGTCFKFNVILNVYETITNAASTKEEEGVDERNHTQAPLPTLQSCSSGSSIRSLSPRFRIRSSSPKPEPSRVIMLIADEYRRKATEKFMEGLGIKVAAAKRLEDLFDVLKKMKQKCLYSSSHSSGSQGSEYLSASSHSRSSRVRVALSSMDGKTDIGAASNGFILIVVETDAGPLLELCKIVSNFKRGLCNPCQVVWLDKKILFKNLDKDTIDPKDMVLSKPFHGSRLFQVIKLLPEFGGSKLNTQESFVDQSSVIQECEDTEKPLSGKKILVVDDTPLMRMIALRTLIKLGAIIEQCENGEAAVHLVGDGLIKDFPNPPYDYILMDCQMPVMNGFEATRKIRKIEKRYGNIRIPIIALTADSDKMTIDAGMDFHLVKPIDRNKFLEAIRDINAKKRSI 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00948 927 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 320 536 IPR036890 -
Adu09g00948 927 Gene3D - 777 926 - -
Adu09g00948 927 PANTHER TWO-COMPONENT HISTIDINE KINASE 10 921 - -
Adu09g00948 927 SMART REC_2 797 917 IPR001789 GO:0000160
Adu09g00948 927 MobiDBLite consensus disorder prediction 551 579 - -
Adu09g00948 927 ProSiteProfiles Histidine kinase domain profile. 272 541 IPR005467 -
Adu09g00948 927 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 537 IPR003594 -
Adu09g00948 927 Pfam Response regulator receiver domain 799 918 IPR001789 GO:0000160
Adu09g00948 927 SUPERFAMILY CheY-like 793 920 IPR011006 -
Adu09g00948 927 PRINTS Bacterial sensor protein C-terminal signature 465 479 IPR004358 GO:0016310|GO:0016772
Adu09g00948 927 PRINTS Bacterial sensor protein C-terminal signature 483 493 IPR004358 GO:0016310|GO:0016772
Adu09g00948 927 PRINTS Bacterial sensor protein C-terminal signature 499 517 IPR004358 GO:0016310|GO:0016772
Adu09g00948 927 PANTHER HISTIDINE KINASE CKI1 10 921 - -
Adu09g00948 927 SMART HisKA_10 265 331 IPR003661 GO:0000155|GO:0007165
Adu09g00948 927 Gene3D - 249 332 - -
Adu09g00948 927 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 256 332 IPR036097 GO:0000155|GO:0007165
Adu09g00948 927 MobiDBLite consensus disorder prediction 564 579 - -
Adu09g00948 927 CDD REC_hyHK_CKI1_RcsC-like 799 917 - -
Adu09g00948 927 Gene3D - 333 545 IPR036890 -
Adu09g00948 927 ProSiteProfiles Response regulatory domain profile. 798 921 IPR001789 GO:0000160
Adu09g00948 927 SMART HKATPase_4 381 541 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00948 Adu-Chr9 16021017 16025087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00948 1 924 Histidine Kinase Gene Family AT2G47430 38.227 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Adu09g00948 HATPase_c 2.6e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00948 - - adu:107464915 1749.18