Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00941 ATGGCTTCGTTGTTGCTGGGTTTGTGCGAAGAAGCAGAAAAGGGTAGTGCTCATCGAAGATTAGGCTCAACGGAGATGGTGGTGATGGAGAAGAAAGGAGAAAGAAGGAGAATGAGGGGTTTGGCCGGTGACGATGAAGGAAGAGCCTATCCCAGCCTTTCTCCCTCTCAAGTCTCAATATCCCTAATTTCCCAAACTCAAACCACTCTCTCACCTCTCCCCGTACCTTCCTCCCGCCGCGCAACCGTCCTCCGCCGTCTCTACCACCAACCTCCAGGGTGCTATTTGGAGAAATTGAGATCAGGAAGCTGGATTGGGGATCGCAAAACAGATAGAATAGTTGATCAATCAGAAGTCTTTTGTGGTGTTCACTTCGTTCTTTTTGGTTTCAGTCCCGAGGATGAAACCGAGGTTCGGTTCAAGCTTGTGAACGGTGGTGCAGTGGATGAAGGCAAGTACAATGGAAGTTGCACGCACGTCATTGTCGATAAGATCATATATGATGATCCTGTGTGTATTGCTGCCAGAAACGATGGAAAGACAGTGGTGACTAAATTATGGGTTGATCATAGCTCTGATATTGCAATGCCCGTCGATGCTTCCTCCGTTATGTACAGACCTCTTAAAGATTTAAATGGAATACCTGGTGCCCAGAATTTGGTTGTGTGCTTGACTGGTTATCTACGACAGGATCGTGATGATATTATGACAATGGTTGACCTCATTGGTGCAACATTTCTTAAGCCCTTGGTGGCAAACAGGGTTACTCATCTTGTATGCTACAAATTTGAAGGGGAGAAGTATGAGCTTGCCAAGAGAATGGGAACAATAAAGCTAGTTAATCATCGTTGGTTGGAAGATTGCTTGAAATTCTGGGCGCTTCTTCCAGAAGAAAATTACAACAAGAGTGGCTATGAACTAGAGATTATGAAGTTAGAAGCTAAGGATTCTGATGAAGAAACTGAAGATTTTGATCTGGGGCAATCTGAGAGAAATATAAGCAGAAGTCCCCTCACTGCAAAATTTGGTGTTGAGGCAACTAGTGGCTTATTAAAATCAGATCGAGAGCTTTCAAGTGCCCAGCCAGAATCTACTAGTCTCAAGAATTCACCAAAAGTTGATAATAGTAAAGAATCTTCAGTTATTCAAGGTAATAACAACGGAGCTGATAGAGACATAAGCTTTAGTAATGTTGATGAGCCTAAGGCAATGGATAAGTTTCTTGATGTTGCTATAGGTGCTACATCATGTCAGATACCTGAGACAGATGTTAAGATCAGGGAGTCAAAGAAGGCCAATTCTCCAAAGACAGGCTGCCAGGATGTTCTCATAACTGAAAAAGCAGAACCACATGCTGAAACTTTTAATAAGCTGGCCAATGATTTCGGATCACCATCTACTGCAAGTGCTGAAAGGGTCACACGTTCTGAAGCAAAGCTCAGTTCTATCAAGTATTATTCTAAGAACAAAAGGGGATTCACTCTTCCAAGGAGCTTAAATGATGGTTTGGATAATGGAGCTGGATCTACTGTGTCACCTTTGGCTGATTTGAAATCGGGAAACAAACATAAAACCCCGTCCAATATGGTATTAAATGGCAGTGGGGGAATCAAATCAACCAGTGCTAAAAATTCTGGGGATGTGACAATTGGTAAATTGCCGCAAAAAAGGGTAAACGAAGCTGCTTCTAATACATTAAAATCAAGGAAACTTACTTCCGATGCAAACTTATTTGTCGAGAAAACCACTTCAGAAAATGGTAAATCTGAAGCACGAAAAGTGACATCTATGGTTGAGGAACCATCCAAGTCTGAACCCTGTTTTTCTGCTGGAAAAGATAGTTTTGACAAACCCAACAAAAACTCATTTTCTAAATCCATAGCTTCTATATCCAATTCCCTATCATTTGATGAGCCTTTTACAAGAGATATAAGCCCAAAGTCAGCTCGAAGTGATAAAGCCTATCAGACTGAGTCTAAAATTAATGGGAAGCATGAAATTGCGGGTCATGGAATGGAACAAGTTGCTGGTAATGAAGTTGAGAAACACAAAGTTGCAAAAAATCTGGAGGGGTCCCCTGACAATAAGAACCCTCTGAATGGGGAATCCCCAAATTTAGATTTAGGCAATGAAGAAAGTACTAAGCTGATTAAAAGATCACCCCGCAAGAAATCAGTTGCCAAGAGAAGTTTTGGCTCTAAGCCAAAAGTTGGTGCTACTGCTAAACAGAAAACACTAGTTTCCTCAAACAGGACCATCCAGCAAGGTGAAGCTGTAAACTTTTCCAGTCGAATCAAAGAGGTACCAATTGACAATGGCGATAAACCTCAACCTATGACTGATGATAATAATAAGTCAGAGGAGCAAGAAACTGTTGTTAAACATGCAGAAGATGCCAATGGCAGACTTGAAACTATGGATGATGAAACAGAGGCTCCTGATGATAAATGTGAATTTGAGCTGGGAATGAAACACGATGAAAATAAAAACAAAGCTGATGAAACAGCAGAAAAGTCAGAAGACATTCACCATGTAACAGAATGTGAAGCAGCAGTGCCTGAGAAGGAAACTGCAGAGTTAACTGAAAAAGAGAAGGCACCTTCAGTAGATGACTCAACCATGAAACGCGAAGTAAAACATCAAGTGAAAAAGCGTCCTCTAAGTATTGCCAAGAAGGCCACTGTTGCAAAGGGACTACAGAAATCTAAAGTGGCACTGTCTGAGAATAAGATAAGCATGGAACGGGAAAATGTGGCACGAATGAAATCTGCAGAAGAAGTATCTCATGCTACAGATGCGAGCAACAAATCCTTCGCACCAAGAAAGCCATTTGGAAATTCAGAAGAACAGAAGGAAAATAGACCAATTGATGAGGGAGAGCAGGATATGCCTGAGGCCAAATCTGTTGCCAATCGAACTAATAAATTGAGTTCAAAGCCAGAAAAAATAAACCCCAAGCAAACAGGTTATAATCCACCTATGTCAGAAGCTAACAAAAGATTGAAAACTGAACCACCATGTTTCATATTAACGGGGCATCACTTTCTGAGAAAGGATTTCCAACAATTGATAAAGAAGTTAAAGGGCAAAGTTTGCCGGGATTCTCATCAGTGGTCATATCAAGCAACCCACTTCATAGCACCAGAGCCTCTACGCAGGATAGAGAAATTTTTTGCTGCTGCGGCATCAGGAAGGTGGATTCTGAAAACTGATTTCTTAACTGCTAGCAATCAGGCAGGGGAATTTGTGGAAGAGGAACCTTATGAGTGGCACGATATTGGTCTCAACGAGGATGGCACGATCGATATGGAGGCTCCTAGAAAGTGGCGGCTGCTGAAAAAGCGAACAGGTCATGGTGCCTTCTATGGAATGCGCATTATTGTGTATGGTGATTGCATCACTCCACCTTTGGATACTCTGAAGCGAGTGGTCAAAGCTGGAGACGGAACAATACTAGCTACCTCTCCTCCTTACACGCGCTTCCTTGGTACCGGAATCGACTATGCCATAGTTACTCCTGGAATGCCACGTGTCGACCTGTGGGTACAAGAGTTCTTAAGATACGAGATACCTTGCATTTCGGCTGACTACTTAGTCGAATATGTATGCAAACCAAGTTCCTCACTTGAGAAACATGTATTATATGACACTCATGTTTGGGCAGAAAGGTCATTTTCCAAACACCAGAATAGAGCAGAAGAGACCACTGATATTGAAGAATCAATTAGTAGCACTCCTGAAAGCAACGATATAGCTTGTGAAGTTTGTGGATCAAGGGATAGAGGGGATGTGATGCTGATTTGTGGTGATGAGAGTGGTTCTGTTGGTTGTGGAGTTGGTACACATATTGATTGTTGTGATCCTCCACTTATGGATGTTCCTGAGGAGGATTGGTTTTGCTCTAAATGCATTGTTAAACGAAACTGCTCAAACTCTCCCAAGAAAAGGAAAAAGGGTGGCTTCTCCAAGAGTAAGAGAAAATGA 3984 0.4212 MASLLLGLCEEAEKGSAHRRLGSTEMVVMEKKGERRRMRGLAGDDEGRAYPSLSPSQVSISLISQTQTTLSPLPVPSSRRATVLRRLYHQPPGCYLEKLRSGSWIGDRKTDRIVDQSEVFCGVHFVLFGFSPEDETEVRFKLVNGGAVDEGKYNGSCTHVIVDKIIYDDPVCIAARNDGKTVVTKLWVDHSSDIAMPVDASSVMYRPLKDLNGIPGAQNLVVCLTGYLRQDRDDIMTMVDLIGATFLKPLVANRVTHLVCYKFEGEKYELAKRMGTIKLVNHRWLEDCLKFWALLPEENYNKSGYELEIMKLEAKDSDEETEDFDLGQSERNISRSPLTAKFGVEATSGLLKSDRELSSAQPESTSLKNSPKVDNSKESSVIQGNNNGADRDISFSNVDEPKAMDKFLDVAIGATSCQIPETDVKIRESKKANSPKTGCQDVLITEKAEPHAETFNKLANDFGSPSTASAERVTRSEAKLSSIKYYSKNKRGFTLPRSLNDGLDNGAGSTVSPLADLKSGNKHKTPSNMVLNGSGGIKSTSAKNSGDVTIGKLPQKRVNEAASNTLKSRKLTSDANLFVEKTTSENGKSEARKVTSMVEEPSKSEPCFSAGKDSFDKPNKNSFSKSIASISNSLSFDEPFTRDISPKSARSDKAYQTESKINGKHEIAGHGMEQVAGNEVEKHKVAKNLEGSPDNKNPLNGESPNLDLGNEESTKLIKRSPRKKSVAKRSFGSKPKVGATAKQKTLVSSNRTIQQGEAVNFSSRIKEVPIDNGDKPQPMTDDNNKSEEQETVVKHAEDANGRLETMDDETEAPDDKCEFELGMKHDENKNKADETAEKSEDIHHVTECEAAVPEKETAELTEKEKAPSVDDSTMKREVKHQVKKRPLSIAKKATVAKGLQKSKVALSENKISMERENVARMKSAEEVSHATDASNKSFAPRKPFGNSEEQKENRPIDEGEQDMPEAKSVANRTNKLSSKPEKINPKQTGYNPPMSEANKRLKTEPPCFILTGHHFLRKDFQQLIKKLKGKVCRDSHQWSYQATHFIAPEPLRRIEKFFAAAASGRWILKTDFLTASNQAGEFVEEEPYEWHDIGLNEDGTIDMEAPRKWRLLKKRTGHGAFYGMRIIVYGDCITPPLDTLKRVVKAGDGTILATSPPYTRFLGTGIDYAIVTPGMPRVDLWVQEFLRYEIPCISADYLVEYVCKPSSSLEKHVLYDTHVWAERSFSKHQNRAEETTDIEESISSTPESNDIACEVCGSRDRGDVMLICGDESGSVGCGVGTHIDCCDPPLMDVPEEDWFCSKCIVKRNCSNSPKKRKKGGFSKSKRK 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00941 1327 MobiDBLite consensus disorder prediction 693 710 - -
Adu09g00941 1327 Pfam PHD-finger 1253 1305 IPR019787 -
Adu09g00941 1327 Pfam twin BRCT domain 220 284 IPR001357 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 967 994 - -
Adu09g00941 1327 SMART BRCT_7 215 292 IPR001357 -
Adu09g00941 1327 SMART BRCT_7 1118 1205 IPR001357 -
Adu09g00941 1327 SMART BRCT_7 117 195 IPR001357 -
Adu09g00941 1327 SMART BRCT_7 1000 1080 IPR001357 -
Adu09g00941 1327 SUPERFAMILY BRCT domain 109 199 IPR036420 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 585 599 - -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 353 393 - -
Adu09g00941 1327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1237 1326 IPR013083 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 514 548 - -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 778 809 - -
Adu09g00941 1327 SUPERFAMILY BRCT domain 1017 1094 IPR036420 -
Adu09g00941 1327 Pfam BRCA1 C Terminus (BRCT) domain 1015 1076 IPR001357 -
Adu09g00941 1327 Gene3D BRCT domain 1000 1116 IPR036420 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 643 657 - -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 514 549 - -
Adu09g00941 1327 Gene3D BRCT domain 104 202 IPR036420 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 637 657 - -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 742 761 - -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 688 885 - -
Adu09g00941 1327 ProSiteProfiles Zinc finger PHD-type profile. 1250 1306 IPR019787 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 583 619 - -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 919 998 - -
Adu09g00941 1327 ProSiteProfiles BRCT domain profile. 1017 1090 IPR001357 -
Adu09g00941 1327 SMART PHD_3 1252 1304 IPR001965 -
Adu09g00941 1327 ProSiteProfiles BRCT domain profile. 218 302 IPR001357 -
Adu09g00941 1327 Gene3D BRCT domain 1117 1220 IPR036420 -
Adu09g00941 1327 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 116 1303 IPR044254 -
Adu09g00941 1327 SUPERFAMILY FYVE/PHD zinc finger 1239 1310 IPR011011 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 945 965 - -
Adu09g00941 1327 Gene3D BRCT domain 208 332 IPR036420 -
Adu09g00941 1327 CDD BRCT_TopBP1_rpt7 1005 1080 - -
Adu09g00941 1327 SUPERFAMILY BRCT domain 218 301 IPR036420 -
Adu09g00941 1327 MobiDBLite consensus disorder prediction 816 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00941 Adu-Chr9 15761628 15775095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00941 238 344 Core DNA Replication Machinery Family AT4G02110 63.551 2.08e-35 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Adu09g00941 BRCT 2.5e-06 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00941 K10728 - jre:109009928 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00941 09 15761628 15775095 Adu09g00941 09 15761628 15775095 ECH