Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00937 ATGGGCGACGATGACACTAGGACGGATGGGCAGCCATGCGACTCTACAACGACACGGACGTGCATGGCAGAAGGAAGAATAATGGTTTCACATCCTTCCACTTTCCTTTCGCGCGCAGGAGCTACACGGCGAAGGGAGCAGTCCAATGACGGTGAAGAACGACAACGCGGAGactgtttagaagctcttTTCTTGGTAAACCAGAGAATGCTTAGTAAGGATATTCCGGAATGGGATTTGGCAAAGCATATTCAGGAGGTTATGAATTGGAGAGTCTCTATTCTTTTAATTCAGAGGACTGCAAATAGTGTTGCAGATTGTATGGCTAAAGCAGCTGCTTCTGTCGCGGACATTCACTCGAATTGGAGCCAACCATGGACAACGCCATCTTCCTCCGCCACGCCAATCTTCACCTCCAGCCGCCGAATCTCGCCGGAAGTCCCTCAAACCTCTTCCACTTCCTACTCTTACATCATCGACTCCCTACCGCTTTTCACCTTCTCCTCCGTCACTCGCCGCTCCTCCGCCGCCGACTGCGCCGTTTGCCTCTCGAAGTTCCGTAACGACGATCTCCTCCGCCTCCTACCTATCTGCTGCCACGCCTTCCACGCCGAATGCATTGACACCTGGCTTCAGTCCAACCTCTCCTGTCCGCTCTGCCGATCCGCCATTGTCGCCACCGAATCGGACCTCGGCAAGGTCCTCCGCTCGTCTTCCTCCACCGCCGGCAGTGACAGTTTCCGCCTCGAGATAGGGAACGTGAGCCGCCGCGGCACCGCGCCCGATGGCTCCGCCGCAGTTTCTGGCGAATCCCGCGCCGGAGGCGCAAGGTCTAGGTCATACTCCATTGGATCGTTCGAGTATTTCGTGGACGAAGATTCGGAAGTTCCATTCAGCCACGCTCATCGAAGAAGCACGTCCGATCAGAAGGACATTCCGGCGTCGGCGGAGGCTCCGGCGAGTCAGCATGAAGCGAACCTCGCCGGCGATGTTGGCGGCGTAAGGAGCTGGCTGAAGGAGTACATGGATAGAGTCTCAGCTTCTATATCGACACGAACGGCGTCGTTTCGAAGTTCTGGAAGGTTCTTCAGCGGTACTGGTGGGAGTAGTCGCCGAAGCGACGTCGTTCCAGTCGTAGCTGCAGAATATGACATTGAAGGTAACAGAATTGGTGAAGAGATCACCGAAATGTTTCGCTGGCTCTCAGGGGTATGA 1215 0.5481 MGDDDTRTDGQPCDSTTTRTCMAEGRIMVSHPSTFLSRAGATRRREQSNDGEERQRGDCLEALFLVNQRMLSKDIPEWDLAKHIQEVMNWRVSILLIQRTANSVADCMAKAAASVADIHSNWSQPWTTPSSSATPIFTSSRRISPEVPQTSSTSYSYIIDSLPLFTFSSVTRRSSAADCAVCLSKFRNDDLLRLLPICCHAFHAECIDTWLQSNLSCPLCRSAIVATESDLGKVLRSSSSTAGSDSFRLEIGNVSRRGTAPDGSAAVSGESRAGGARSRSYSIGSFEYFVDEDSEVPFSHAHRRSTSDQKDIPASAEAPASQHEANLAGDVGGVRSWLKEYMDRVSASISTRTASFRSSGRFFSGTGGSSRRSDVVPVVAAEYDIEGNRIGEEITEMFRWLSGV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00937 404 SMART ring_2 179 220 IPR001841 -
Adu09g00937 404 MobiDBLite consensus disorder prediction 299 326 - -
Adu09g00937 404 CDD RING-H2_PA-TM-RING 178 221 - -
Adu09g00937 404 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL4 127 371 - -
Adu09g00937 404 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 230 IPR013083 -
Adu09g00937 404 SUPERFAMILY RING/U-box 156 226 - -
Adu09g00937 404 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 127 371 - -
Adu09g00937 404 MobiDBLite consensus disorder prediction 34 54 - -
Adu09g00937 404 Pfam Ring finger domain 178 221 IPR001841 -
Adu09g00937 404 ProSiteProfiles Zinc finger RING-type profile. 179 221 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00937 Adu-Chr9 15599217 15603210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00937 158 314 C3H Transcription Factor Family AT2G18650 30.233 1.65e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00937 K10663 - gmx:100776516 365.155