Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00875 ATGCAGAAGGCAGAGACAGCGGCGGACCTCTTCTCCCTTCGCGTTCCCTTCCCCCTTTCCCCGAATAGCAGAGCAGTGGCGGCAGCGAAGAGCGGCGGCAGTAATGAAGACCGAATATTGGCAATGTCATTTCCTGCAGAACGAATGCAAGCAGTGTATCAAAATCCTCTACGGCAGGTGAAATCTGGGTTTGACATAACACACCATGAACATTATAAGATCTATAATCTCTGTATAGAAGAAAGTTATGATCCGGCAAACTTTCATGGACGTGTCGAAGCATACCCTTTCGATGATAATAATGTACCGCCCCTTGAAATGATCAAAGATTTTTGTGAAAGTGTGCATTCATGGCTATCAAGTGATCCAAAAGATATTGCTGTCATTCATTGCCTGGCAGGGAAGGGTAGAACTGGTTTAATGGTGTGTTCATACCTAACTTATTCTGGCATGCCAGCAGATGAGGCTTTTCAATTGAATGCAGAGAGAAGGACAACAAATAATGAAGGAGAGTTCGGTGAGAGCAGGGGAGAAGATCCGAGGACAGCACACGGTGAAGATGAGCATTTTAAGGAGAATAAGGGGGAGAGCATGGGGAGAGTTGCGCCAGATGCTATGGAGGATTCGCGTAAGGGTAGTCATAGTGAGATTCAGAGGATATCTTTTCGCGATAAGGTTATTGGTTCTTCACAAGCAGCGGGAAGTAGATGGttgttatgtGAGAAGTGCAACTGTTTCGGCCATACCGCAGTCACATGCAAGGGAGAGGCAGTAGATGTTAAGTCCGGGGATGAGACTCGCAGTGATGGGACGGTAAGGAAGGCAATGGATCTGAGTGGCCAACGCTTAGGAAACCAAATGGAGAAAGATTTTGAATTTGGTAACAATCCCAATTTGTCCGCGTCAGTTACGGATTATGTGGAGCAAGATGAGGTTATATTGCATGGCAAGGAGGCTAAAAATGGGCACGTGATGGAGGAGGAAGGGTGGACTAAAGTAATAGCTAAGGGAAAAGAAAAATTGGTCTTTTCAAAAGTAGCCCAAAATGGTTCATTGGAAAAGAAGCACTTGGTTTCTACAAAGAAGATTGGGCTAAGTTCAGGTAAAGGCCCAGTCATAAAGAAAGGAGAGAAGGCTTTGATGGGCCATGGGGCAAGTATTGGGTCTTCCAAGTTCAGGAAGCACCATGCTCCAATGCTTGGCAAAGGAAAAAATCAGGGTGCCAATCTCATACCCGCTGTAGCGACCTTCACTCCTATAATCAAGAACGGCCATAAGAGGCTGAGACCGGCATCTCTCCAAAGCTCGCCAGTGCCGCTGAGCAATGATGGCGGAGTGGGTCAACAGCAACGGATTTCACCTTCTACGTCACCTAATGCGATGGGGAGTGCTCCAGAACAAGTGTTGGGAATGGAGAAGCAGGACTCTCAAAAATATCCTGGCGGCCCGTCTACTTCTTCATAA 1464 0.4658 MQKAETAADLFSLRVPFPLSPNSRAVAAAKSGGSNEDRILAMSFPAERMQAVYQNPLRQVKSGFDITHHEHYKIYNLCIEESYDPANFHGRVEAYPFDDNNVPPLEMIKDFCESVHSWLSSDPKDIAVIHCLAGKGRTGLMVCSYLTYSGMPADEAFQLNAERRTTNNEGEFGESRGEDPRTAHGEDEHFKENKGESMGRVAPDAMEDSRKGSHSEIQRISFRDKVIGSSQAAGSRWLLCEKCNCFGHTAVTCKGEAVDVKSGDETRSDGTVRKAMDLSGQRLGNQMEKDFEFGNNPNLSASVTDYVEQDEVILHGKEAKNGHVMEEEGWTKVIAKGKEKLVFSKVAQNGSLEKKHLVSTKKIGLSSGKGPVIKKGEKALMGHGASIGSSKFRKHHAPMLGKGKNQGANLIPAVATFTPIIKNGHKRLRPASLQSSPVPLSNDGGVGQQQRISPSTSPNAMGSAPEQVLGMEKQDSQKYPGGPSTSS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00875 487 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 37 165 IPR029021 -
Adu09g00875 487 ProSitePatterns Tyrosine specific protein phosphatases active site. 129 139 IPR016130 GO:0016311|GO:0016791
Adu09g00875 487 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 37 170 - -
Adu09g00875 487 ProSiteProfiles Phosphatase tensin-type domain profile. 37 177 IPR029023 -
Adu09g00875 487 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 109 164 IPR000387 GO:0016311|GO:0016791
Adu09g00875 487 PANTHER BNAC03G16750D PROTEIN 37 170 - -
Adu09g00875 487 MobiDBLite consensus disorder prediction 434 463 - -
Adu09g00875 487 MobiDBLite consensus disorder prediction 167 216 - -
Adu09g00875 487 MobiDBLite consensus disorder prediction 430 487 - -
Adu09g00875 487 Gene3D Protein tyrosine phosphatase superfamily 36 176 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00875 Adu-Chr9 13555344 13565141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00875 37 170 Protein tyrosine phosphatase (PTP) family AT5G39400 72.388 1.64e-67 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00875 K01110 - aip:107627863 405.216