Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00871 ATGACTGCTGAGTTATCATCCCTGGGTCTTTACAACCATGCATTGCTTGAACCATACTCTTCTAATCTTCACGAATCTATGCCTTCATCACAATGCATTGCTTTACGTTTACATGCTTTACATGGTTTCAATTATTGCGTTACAGACTCTTCGTCAAATGGCGGCATGCATGGTTATAGGAACATGCACAACACTGTCTTCTTCTTTTTGTTTCCTTTTACAGCAAGGTTCGTGCATGCTCTTGCAACAAACAACATGGTTAGCATCTTCAACAATGTCAAGGACATTGACGTGTCCCATGACAACTTGAGCTATAGGATCAAGGGGAAACGGTACTGTTCGACGTACTTTGTGGGAAGAATTTGCAACTCAATTGGAGAACAAGGGCACGAATACGAGGAAGGATTTGCCATGGACCATTCATGGGAGTTAGGTACAATGGGTATATCAAATGCCAACTACAATTCCATTCTACACATCAATGGTGATTTTCAAGAGGTCAAGGATTTTCGAAAGAGTGTCATAATGTCAGGTGTACCTAATGCAACTCAAGTTTCCCAAATAACGGGAGAACTGGCATATTCAATTGAAGAGGACCTACTTAACCATTCCATTTATAAGCCCATATCCGAGCTGAAGGATTCAATTGAGAATGGGCTCTTTGTCATTATTGACACGGTTATATCCATTGATCCTAAGAATGGGTGGTGGTACAAGAGTTGCAAGCAGTGCTTCCATTCTTTACAAGAAGCCGAGAACTTATACCACTGTGCTAGGTGTGAGACATACCCATCGTCTCACACTCCAAGGTTTAGCATAAACATGCGAGTTGCTGATAAGACTAATACGGCTTCCTTCCTACTGTGCGATAAGGAAGGGTCCAAATTCCTTGGTATATCCGCATCCGATTTCAGACTTGCACAACTAACCAGAGGTGGAGTTAATGAAGAATATCCAACAGAGCTTAACTCACTGATGGGAAAGAAATTTTTGTTCAAAGTTTCTGTGAAAATGGAATATTTGAATGCATTCCAATCATGTAGGATAATTGTTACTAAGCTTTGTGGGGACAACTCAGTTATCACAAAATTTACTGCAAAGAATAGCTTAGACGAGGTTACAAAATCCTTCAAAGTTTCGGTGGTTGTCTTTGTATTTGAGTTGTATGCTTATTTTGTTTATGCCATGCAGCACAATATGGGTATGGATAATTCTGAACTGCTGAGCATGAACATTGACTCTGCTGAAATCCCAAAGGGTACAATCTCTCCCTCTGTTGAGACTCTATCCCAGGGAACAAATGATGCATTCTCAACTCCAAATGATAAAATCATCACTGGTGGGTGGTCTAAGAAGCTGATCAAACTGTACCCGGATTCTGGTCATGCATCATCCTCCAGGAAAGTGACAAAGGGTGTCACTACAACCATTGTTGAGATTCATGATGATTAG 1452 0.4077 MTAELSSLGLYNHALLEPYSSNLHESMPSSQCIALRLHALHGFNYCVTDSSSNGGMHGYRNMHNTVFFFLFPFTARFVHALATNNMVSIFNNVKDIDVSHDNLSYRIKGKRYCSTYFVGRICNSIGEQGHEYEEGFAMDHSWELGTMGISNANYNSILHINGDFQEVKDFRKSVIMSGVPNATQVSQITGELAYSIEEDLLNHSIYKPISELKDSIENGLFVIIDTVISIDPKNGWWYKSCKQCFHSLQEAENLYHCARCETYPSSHTPRFSINMRVADKTNTASFLLCDKEGSKFLGISASDFRLAQLTRGGVNEEYPTELNSLMGKKFLFKVSVKMEYLNAFQSCRIIVTKLCGDNSVITKFTAKNSLDEVTKSFKVSVVVFVFELYAYFVYAMQHNMGMDNSELLSMNIDSAEIPKGTISPSVETLSQGTNDAFSTPNDKIITGGWSKKLIKLYPDSGHASSSRKVTKGVTTTIVEIHDD 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00871 483 CDD RPA1_DBD_C 209 342 IPR013955 -
Adu09g00871 483 Gene3D - 201 361 IPR012340 -
Adu09g00871 483 Pfam Replication factor-A C terminal domain 226 353 IPR013955 -
Adu09g00871 483 SUPERFAMILY Nucleic acid-binding proteins 209 355 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00871 Adu-Chr9 13480838 13484684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00871 230 351 Core DNA Replication Machinery Family AT5G08020 28.455 4.43e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00871 - - ahf:112707100 402.519