Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00832 ATGACCATGTCACCGGAACAAATGAACATCGTCTTTGGCATACTCATAGTTGGAGCACTCATAATTGCCTTCACATTCTTCAGCTTCACCATGCTTGGATGGTGCAGTCACACTAGTGACATGCCGGCACCACCGGGAATATATTTGGACAACAAGTTCTCCGGCTGCGGCGGCGCGAGTTTGGAGTCGCACTCCATTACCTTCCAGTACAAGGTAGGTGGCTCTGTTGATGGAAGGAACCAAACAGAGTGTGTTATATGCTTGGCGCAGTTCGAAGAAGAAGAGAGTGTTCGGAAGCTTCACAGTTGCAAGCATGTTTTCCACACGTGTTGCATTGATAGGTGGCTTGGCTCTCATACCGGCTGCCCCTTGTGCCGGAGTCAGATCGACCAAGCCGCCGCTTCCCCAAATGGAAATAACCATATGATCTTGGTTTCTGTTGATTCCTGA 450 0.4956 MTMSPEQMNIVFGILIVGALIIAFTFFSFTMLGWCSHTSDMPAPPGIYLDNKFSGCGGASLESHSITFQYKVGGSVDGRNQTECVICLAQFEEEESVRKLHSCKHVFHTCCIDRWLGSHTGCPLCRSQIDQAAASPNGNNHMILVSVDS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00832 149 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 59 139 IPR044675 -
Adu09g00832 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 135 IPR013083 -
Adu09g00832 149 ProSiteProfiles Zinc finger RING-type profile. 84 126 IPR001841 -
Adu09g00832 149 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 59 139 - -
Adu09g00832 149 Pfam Ring finger domain 83 126 IPR001841 -
Adu09g00832 149 SUPERFAMILY RING/U-box 79 133 - -
Adu09g00832 149 SMART ring_2 84 125 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00832 Adu-Chr9 12509314 12509763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00832 69 132 C3H Transcription Factor Family AT4G33565 56.923 1.18e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00832 - - adu:107464721 316.62