Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00829 ATGTTTCAAAATCCAAGGACATTAGCTTGTAAAATGAAATATATTGGATTAATTGTTTGTGTAATAGCAATATGTATTGCAATTATCGCTCAGAAATTTGATGCAGAGACACCGGTAGAAGAAAATACTCCTCCTTCGTATCCAGAGGCATCATCACCAACTCATGACACAAAGTTTgatgtgttcatcagcttcagtggcaaagacattcgggaaggtttgctcagccatctcaccaaggcattacggcagaagcaaatcttcaccttcgttgacacgaagctcgagcaaggcggagaaatctcgcaagagcttctccaagcaattgaaaagtcgttgatctcgttagttgtgttctcagaaaactatgcgttttcgacttggtgtttggatgagctggtcaagattatggagtgtagaagagaaaaaggacaaattgttttaccggttttctacagagtggaaccgtctcatgtgagacaccagaagggagttttttctactgcctttgctaaacaagagaaaaggtttggtaaggaaaaggcacaaacatggagaTCCGCTTTTCAGGAGGCTGCTAATATTTCAGGCTTTCATTCAGCAAAATTCGGGAATGATGCTGAGCTTATTGAAGAAATCATCCAATCAGTGAACACTAGGTTGAAAAATATGCGCCAGTTTTCCTCAAAAGGACTTTTCGGAATTGCTAAATCAATTTCTCGTGTTGAATCATTGCTTCGCCAAGAGCCAGAGAGCGTCCGTGTCATTGGAATTTGGGGCATGGGTGGTTTTGGAAAGACAACCGTTTCAGAAGTAGTTTATAACCTACTTCGTGATGAATACGAAAGCGTTGTTTTTCTTCGAAACGTAAGGGAAGTATCATTGAGACATGGAATTATTTACTTGAAGAATGAACTCTTTTCTAAACTCTTAGGCGAAAATCTTGAAATTGACACACAAAATGGATTGCCTACTTATGTTGAGAAGAGAATTGGCCGCATGaaggttcttattgttcttgatgatgttaatcaatcagagcagtttgaaattctagttggaaccccgcaaagttttggatcaggtagtagaattattgtaactaccagagataggcaagtgcttgcgaaatatgctcatgctaatgatacatacaaggttgaaccattggaatctgatgaagcacttcagcttttcaatttgattgcgtttcaacaaaatgaagttgttgaaaaggagtatcgtgtgttagcagagagggtggtggatcatgccaaagggattccactggttctcaagactttgggtcatttacttcatggaaaagaaaagtggatatgggaaagtgaattagagaaacttgggaagattccgaataagaaggtttttgatatgatgaggctgagttatgatgagttggatcgccaagagaaatcaatgcttttggacattgcatgcttttttgatggaATGAAGTTGAAGGTGAAGTACTTAGAGAGTTTGTTAAAGCATGGGGATTTTCCAGTTCCTGCAGCATTGAAAAGACTTGAAGATATATCTTTCATAACCATTTCTAAAGAGGATGTAGTGACAATGCATGATATTGTACAAGAAATGGCTTGGGAGATTGTTCGCCAAGAATCTATTGAAGACCCTGGTAACTATAGTCGAATTTGGAATCCTGAGGACATTTATCAAGTACTGAAAAATAATCAGGGGAGTGAGGCCATTAGAAGCATAAACTTCAGCTATTCCAAAGCAACAGTTAGGGACATGCAGTTAAGTCCACAAGTATTTTCTAAGATGAGTAAGCTGCGATTTCTTGACTTTTATGGGGAACAACACCTCTTACACTTTCCCGAGGGGCTTCAACAGTTGCCAAGTCGACTCAGATATCTTCGTTGGACTTATTACCCTCTCAAATCATTACCAAAGAAATTTTCTGCTGAGAAGCTAGTTATATTGGAACTACCTTATAGTCAAGTGGAAAAACTTTGGTATGGGATCCAGTTGAAGGAGTTTCCAGACTTATCAAAAGCCACCAATCTTGAGAAGTTGGATCTCAAATATTGTCTCCGCTTGACTCGTGTCCATCCATCTGTCTTCTCCCTCAACAAGCTTGAGACATTGGATCTAAGCTGGTGCTCTCAACTTGCCAGACTTGAAACTAATGCTCACTTGAAATCCCTTCGTTATCTGAGCCTCTATCACTGCAAAAGATTGAACAAATTTTCAGTGATATCAGAAAACATGACAGAACTGGATTTGCGACACACATCCATCCGAGAATTGCCCTCGTCCTTCGGATATCAAAGCAAACTCGAAAAGCTTCATCTAGCAAACTCTGAAGTAAAGAAGATGCCTGGTAGcatgaagcttctcacaagtctgaaatatcttgacataagtgattgcaagaatcttcaaactctgccggagcttccCCTCTCCATAGAAACGTTAGATGCAGATAACTGCACATCATTGAAGGCTGTGTTTTTCCCAAATGCGAGTGAACAGCTGAAGGAAAACAAGAAAAAGGCTGTGTTCTGGAACTGCTTGAAGTTGGAAAATCAATTTCTCAATGCTGTCGCATTGAATGCTTATATCAACATGGTGAGATTTTCAAACCAATATTTGTCTGCAATAGAACATGAAAATGTAGACAATTCTAATGAAGACCCTGAAGCCTCTTATGTTTATCCCGGGAGCAAAGTTCCAAACTGGCTCGAGTATCAAACAAATATGGATCACCTTACTGTTAATCTCTCTTCAGCTCCATATGCACCCAAATTAGGCTTCATTTTATGCTTCATTGTTCCTGCAGTACCATCAGAGGGTTTTAGGCTGATGTTTACAATCAGTGGTGACGATCAAGAGGAAGACGATGTCAACGAAGTCAGGTTGTACGTGGACAGACCAAGGAAGGAGATTTCATGGGATCATGTGATTCTAATATACGACCAACGTTGTAGTAGCTTCCTAAATAACAGAGGTCAAAATCGAAGAATGTTTAACATCAAGGTCTCAGTTGTGTCACTATCCATGACATCAGAGTATGTGGCAGTGGAGTTGAAAGGATTTGGAGTGCACCCAGTAAACCCATTAGAATATCCAAGTTTCATTAGTTTTATTAAAAAAATGGAACAGTTGGGTTATTATACTACTCCTGCTACTGTCAACCCGGTTTCACTGTGGAATGGAATTAGGTCGTGGTTTGGAGCTCACAATTGGGGATAA 3240 0.2827 MFQNPRTLACKMKYIGLIVCVIAICIAIIAQKFDAETPVEENTPPSYPEASSPTHDTKFDVFISFSGKDIREGLLSHLTKALRQKQIFTFVDTKLEQGGEISQELLQAIEKSLISLVVFSENYAFSTWCLDELVKIMECRREKGQIVLPVFYRVEPSHVRHQKGVFSTAFAKQEKRFGKEKAQTWRSAFQEAANISGFHSAKFGNDAELIEEIIQSVNTRLKNMRQFSSKGLFGIAKSISRVESLLRQEPESVRVIGIWGMGGFGKTTVSEVVYNLLRDEYESVVFLRNVREVSLRHGIIYLKNELFSKLLGENLEIDTQNGLPTYVEKRIGRMKVLIVLDDVNQSEQFEILVGTPQSFGSGSRIIVTTRDRQVLAKYAHANDTYKVEPLESDEALQLFNLIAFQQNEVVEKEYRVLAERVVDHAKGIPLVLKTLGHLLHGKEKWIWESELEKLGKIPNKKVFDMMRLSYDELDRQEKSMLLDIACFFDGMKLKVKYLESLLKHGDFPVPAALKRLEDISFITISKEDVVTMHDIVQEMAWEIVRQESIEDPGNYSRIWNPEDIYQVLKNNQGSEAIRSINFSYSKATVRDMQLSPQVFSKMSKLRFLDFYGEQHLLHFPEGLQQLPSRLRYLRWTYYPLKSLPKKFSAEKLVILELPYSQVEKLWYGIQLKEFPDLSKATNLEKLDLKYCLRLTRVHPSVFSLNKLETLDLSWCSQLARLETNAHLKSLRYLSLYHCKRLNKFSVISENMTELDLRHTSIRELPSSFGYQSKLEKLHLANSEVKKMPGSMKLLTSLKYLDISDCKNLQTLPELPLSIETLDADNCTSLKAVFFPNASEQLKENKKKAVFWNCLKLENQFLNAVALNAYINMVRFSNQYLSAIEHENVDNSNEDPEASYVYPGSKVPNWLEYQTNMDHLTVNLSSAPYAPKLGFILCFIVPAVPSEGFRLMFTISGDDQEEDDVNEVRLYVDRPRKEISWDHVILIYDQRCSSFLNNRGQNRRMFNIKVSVVSLSMTSEYVAVELKGFGVHPVNPLEYPSFISFIKKMEQLGYYTTPATVNPVSLWNGIRSWFGAHNWG 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00829 1079 Pfam Leucine Rich Repeat 651 670 IPR011713 -
Adu09g00829 1079 PRINTS Disease resistance protein signature 255 270 - -
Adu09g00829 1079 PRINTS Disease resistance protein signature 330 344 - -
Adu09g00829 1079 PRINTS Disease resistance protein signature 425 439 - -
Adu09g00829 1079 PRINTS Disease resistance protein signature 702 718 - -
Adu09g00829 1079 Gene3D - 219 385 IPR027417 -
Adu09g00829 1079 SUPERFAMILY "Winged helix" DNA-binding domain 460 569 IPR036390 -
Adu09g00829 1079 Gene3D - 56 218 IPR035897 -
Adu09g00829 1079 Gene3D Ribonuclease Inhibitor 556 723 IPR032675 -
Adu09g00829 1079 Gene3D Ribonuclease Inhibitor 725 860 IPR032675 -
Adu09g00829 1079 SUPERFAMILY Toll/Interleukin receptor TIR domain 51 198 IPR035897 -
Adu09g00829 1079 SUPERFAMILY L domain-like 593 843 - -
Adu09g00829 1079 Pfam TIR domain 58 226 IPR000157 GO:0007165
Adu09g00829 1079 Pfam NB-ARC domain 238 455 IPR002182 GO:0043531
Adu09g00829 1079 Pfam C-JID domain 901 989 IPR045344 -
Adu09g00829 1079 SMART till_3 58 195 IPR000157 GO:0007165
Adu09g00829 1079 Gene3D - 389 474 IPR042197 -
Adu09g00829 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 484 IPR027417 -
Adu09g00829 1079 ProSiteProfiles TIR domain profile. 57 221 IPR000157 GO:0007165
Adu09g00829 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 46 1050 IPR044974 GO:0006952
Adu09g00829 1079 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 46 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00829 Adu-Chr9 12394887 12402974 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00829 47 813 WRKY Transcription Factor Family AT4G12020 32.875 1.34e-98 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00829 - - gmx:100802823 1073.15