Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00828 ATGACCGGAGTTTCCATATTCGTAAAAGACAAAAATAGCCCGAATAATAGAGCACACCAACAGGCAGGGTTTTGCCGCGTGTCAACGGCTTCAAAGCTCATTGCTGCAGTGACGGCTGCCGGAGACAGAGTTTCGGCCACTTCCGGCGGAGGCGCATTGTTGAGAATGGCTTCCTCCAGCAGAAAGCCGCATGATCATTGCAAAGGGAGTGCTGACACAGCCCAAGTTGGGAGTGAAAGGCAGGAGCTTGTTCATGATGAAGAGgaaacatgcttggacacgatgattgaagccgatgacttcgacagggacaatgttgacaaatgtgtagggttggccaacagctttgtagagtctgaaGCTGTTCCAGCAAGGTACCTGTTGGGACCGGAAAGAGTTGATGTCAATCAAACTGGTGACATGACAGCATTTTACAGAACCAGATTGTTGAGAATGGCTTCCTCTAGCAGAAAGCTGCATGATCATTGCAAAAGGAGTGCTGACACAATCCAAGTTGGGAGTGAAAGGCAGGACCTTGTTGATGATGAAGAGgaaacatccttggacacagttaatgaacccgatgacatcgacggggacaatgttgacaagtgtgtaaggttggacgatggctttatagagtctgaagtccttcgagctgaggatgtactacatatggagttcaatgatcctgaggaagctagtcgcttctacaatgagtacgggcgagctaagggttttgctataaggcagggaaagaagataaaaaacagtaaaggggaatttgttcggtacacttatctctgcaacagagaaggatttagagacaagaagtggttggacaaaagtgatcgaaagagggaccacaaggctgtaacccgttgcggctgtcttgccgaaatgaggattaagagaaaagctgggagtgggaaatggtatgtgtcgcggtttgttgacgaacataaccatgagGCTGTTCCGCCAAGGTACCTGTTGGGACCGGGAAGAGTTGTCAATCAAACTGGCGACATGACAgcgttgtacagaaccagagtggatgcatttgtgcatctgtgtaagcgtttagcaaaggcagcttgcttgacggatgaggactacaagttgtataccgataggattttgagagatacaattttattagaaatcaagaacgggttgggtgttgaggtcgtgagaggaagtaatgtcaatgctgaggtagcaaaggatccaatccacgtggggacaaagggaacaggttgtgccaacgaagcatctggttcaaagggaacaaagaaacgcaagtgcagcacctggggccgtcgtgggcatcgcaggactaggttcccGAATGGGTCGCCATCAGCTGCATTGCCTGGTGAAGATGCTGTACAAGACCGCACGGGCCACAGGCTTCAAAATGTTCGTATCGACGGAAAAGGACAGTTGACTTTCTGCCTCCGAGTAGTCTGGTTTAGGAACCCCAAACTCTTGTTGGTAGACACTTTAAGACCCAACTTTGATCCTTTAATGGCTGGAGACTGGCCAAAGAGGCGTTGTCAAAATGCTTATTCAATGAAGTACAGTGAACAAGACGACGACCAATTAATTAAAGATAAAATAGGCATCTTTGTATGA 1638 0.2369 MTGVSIFVKDKNSPNNRAHQQAGFCRVSTASKLIAAVTAAGDRVSATSGGGALLRMASSSRKPHDHCKGSADTAQVGSERQELVHDEEETCLDTMIEADDFDRDNVDKCVGLANSFVESEAVPARYLLGPERVDVNQTGDMTAFYRTRLLRMASSSRKLHDHCKRSADTIQVGSERQDLVDDEEETSLDTVNEPDDIDGDNVDKCVRLDDGFIESEVLRAEDVLHMEFNDPEEASRFYNEYGRAKGFAIRQGKKIKNSKGEFVRYTYLCNREGFRDKKWLDKSDRKRDHKAVTRCGCLAEMRIKRKAGSGKWYVSRFVDEHNHEAVPPRYLLGPGRVVNQTGDMTALYRTRVDAFVHLCKRLAKAACLTDEDYKLYTDRILRDTILLEIKNGLGVEVVRGSNVNAEVAKDPIHVGTKGTGCANEASGSKGTKKRKCSTWGRRGHRRTRFPNGSPSAALPGEDAVQDRTGHRLQNVRIDGKGQLTFCLRVVWFRNPKLLLVDTLRPNFDPLMAGDWPKRRCQNAYSMKYSEQDDDQLIKDKIGIFV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00828 545 MobiDBLite consensus disorder prediction 58 79 - -
Adu09g00828 545 MobiDBLite consensus disorder prediction 178 195 - -
Adu09g00828 545 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 160 328 - -
Adu09g00828 545 Pfam FAR1 DNA-binding domain 236 326 IPR004330 -
Adu09g00828 545 MobiDBLite consensus disorder prediction 420 460 - -
Adu09g00828 545 MobiDBLite consensus disorder prediction 173 195 - -
Adu09g00828 545 MobiDBLite consensus disorder prediction 434 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00828 Adu-Chr9 12347364 12352128 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g00828 FAR1 1.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00828 - - adu:107464780 731.865