Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00816 ATGGGCAGACGTCCTTGCTGCTCGAAAGAGATGAACAAAGGTGCTTGGTCAAGAGATGAAGATCAAACCCTCTCCAAATATGTTGCCATTCATGGTGAAGGAAAATGGCAAAAGGTTGCCCAAAATGCCGGCTTGAATAGGTGTGGGAAAAGTTGCAGACAGAGATGGTTGAATTATCTGAAGCCAGGCATTAAGAGAGGCGACATATCTCAGGATGAAGAGGATATGATCATAAGGTTACATCGTCTTCTCGGTAACAGATGGGCCTTGATAGCGAAGAGATTGCCGGGACGAACAGACAATGAAATCAAGAATTACTGGAATACCAATCTCTCAAAGAAGCTTCAACAACAACAACAACAATGGCAGCCACCTCCTCCTTCTTCATCTTCTTCCCATAAACACAAAAACAATAATCTTACTCACAAACATGTACTAGTACCACCCCAAACTCCAATTCCTAGAAGACTCAAAGCTTTTCACTACAATAATAATAATAATAATAATAATAATAATAATAATAATAACACTTCATCAATTAGTCCCTGCAGTGATGATAATAGTGAAGAAGCTTCTCTCACTGATTTTCTCATTGACATTGATGATAATGATGATGATCAAATGCTGTCGGTTACTGATAATGACGACGATCACCGCCATAACTCGAAGCTGCTCGAAGAACAGAGCAATCCAAGCTCATCATCACTATTATCATCGTCAGATCAATGTAACAACTTGTTTATGTCTGAGAAATTTGACCCTTTGGAGACACTTTTGGATGTGGAGCTAAAAAGGGTGGCTTCATTTCTTGGACTCAAAAATTGA 825 0.3939 MGRRPCCSKEMNKGAWSRDEDQTLSKYVAIHGEGKWQKVAQNAGLNRCGKSCRQRWLNYLKPGIKRGDISQDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSKKLQQQQQQWQPPPPSSSSSHKHKNNNLTHKHVLVPPQTPIPRRLKAFHYNNNNNNNNNNNNNNTSSISPCSDDNSEEASLTDFLIDIDDNDDDQMLSVTDNDDDHRHNSKLLEEQSNPSSSSLLSSSDQCNNLFMSEKFDPLETLLDVELKRVASFLGLKN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00816 274 MobiDBLite consensus disorder prediction 160 188 - -
Adu09g00816 274 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Adu09g00816 274 PANTHER MYB TRANSCRIPTION FACTOR 1 271 - -
Adu09g00816 274 MobiDBLite consensus disorder prediction 113 137 - -
Adu09g00816 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Adu09g00816 274 MobiDBLite consensus disorder prediction 113 135 - -
Adu09g00816 274 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Adu09g00816 274 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Adu09g00816 274 Gene3D - 6 66 - -
Adu09g00816 274 SMART sant 65 113 IPR001005 -
Adu09g00816 274 SMART sant 12 62 IPR001005 -
Adu09g00816 274 Gene3D - 69 144 - -
Adu09g00816 274 CDD SANT 15 60 IPR001005 -
Adu09g00816 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 64 IPR017930 -
Adu09g00816 274 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Adu09g00816 274 CDD SANT 70 111 IPR001005 -
Adu09g00816 274 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 271 - -
Adu09g00816 274 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00816 Adu-Chr9 12104253 12107141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00816 1 115 MYB Transcription Factor Family AT2G16720 63.793 3.43e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g00816 Myb_DNA-binding 4.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00816 K09422 - gmx:100101858 288.885