Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00808 ATGTCAGGGCAGCGAGAAACGCTAGCCGGATTAACACTTGACGACGTCTTAGCAAAGCAGAAAGCATTTTACCACTCACAATCCAACACCAAAACCCTCCTTGATATCCTCAAAGACGACGTCTCCTTCAATAAGAACCGCAAGTCTTGGAAAGCATTCAAGGACACGCTTCTGCTAAAGCGTTACGGCTCTGCTTGGACTCGAATTCCCACTTCCGACATTCCCATCTCATTCTGCCGCCGCACCTCTCTCAAACACTTTCAATCCATGGCTGACAACACCGACAACGTTGATGAAGTCCCAGCCTTACCTCCCGCTTCACTCGCACCCAAGGCCACCTTCTCCCGCCGGAGTTCCACCCGCTACAGCTCCCCGTCCGAGGTCACATTCACTGCCGGCGATCCCACGGAGCCGGCCCCTGCCGGCAGCGCGCTACTCCGGCCTCAGCTTTCGCGACGGAACTCCTCCGGCATGGTGTCGGAGCCATTCCGGAAGGGCCGCGTGGTGACGTTCCGGGACAACTTGGACGACGAGGAGCAGGACGAGGAGGACGGGTCACGTGCGGATGGCAGCAGGACACTATCAGCAAGAGAGGCGGTTGCAGCACAGGAGGCGGCGGAGGCGGCTGCTGCAGGGGAGGTTGTTGGAGAGGGAGAGGAAGACGAGGCGACGCAGCCAGTGATGATGTCACTGATGGACTTGTTGGAGGAGACTGACAGAGAGATGGGGCTTGAAGGATCGAGGTACATTCTGAGTGATGAAGAGGATTTTGACGAGGATGAGGAAGATGAGGATGGTGATGGTGATGACTTGGAATACACGTGCTCAGTGTGCATGGTGAGGCATAAGGCTAATGCTATCAGCCGCTGTGGCCACTCTTACTGCAGGATGTGCTCTAGGGAACTCATGGCTGGCAAAGGCAACTGCCCTCTCTGCAACAATTTCGTTGTTGAGATTCTTGACATCTTTTGA 972 0.5566 MSGQRETLAGLTLDDVLAKQKAFYHSQSNTKTLLDILKDDVSFNKNRKSWKAFKDTLLLKRYGSAWTRIPTSDIPISFCRRTSLKHFQSMADNTDNVDEVPALPPASLAPKATFSRRSSTRYSSPSEVTFTAGDPTEPAPAGSALLRPQLSRRNSSGMVSEPFRKGRVVTFRDNLDDEEQDEEDGSRADGSRTLSAREAVAAQEAAEAAAAGEVVGEGEEDEATQPVMMSLMDLLEETDREMGLEGSRYILSDEEDFDEDEEDEDGDGDDLEYTCSVCMVRHKANAISRCGHSYCRMCSRELMAGKGNCPLCNNFVVEILDIF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00808 323 PANTHER OS01G0917900 PROTEIN 4 323 - -
Adu09g00808 323 CDD RING-HC 275 312 - -
Adu09g00808 323 MobiDBLite consensus disorder prediction 110 225 - -
Adu09g00808 323 MobiDBLite consensus disorder prediction 112 131 - -
Adu09g00808 323 ProSiteProfiles Zinc finger RING-type profile. 275 313 IPR001841 -
Adu09g00808 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 323 IPR013083 -
Adu09g00808 323 SUPERFAMILY RING/U-box 274 319 - -
Adu09g00808 323 SMART ring_2 275 312 IPR001841 -
Adu09g00808 323 PANTHER OS01G0917900 PROTEIN 4 323 - -
Adu09g00808 323 Pfam Zinc finger, C3HC4 type (RING finger) 273 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00808 Adu-Chr9 11871604 11875081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00808 7 323 C3H Transcription Factor Family AT3G07120 32.687 6.19e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00808 - - lang:109359938 274.248