Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00798 ATGAACATGGAACCAAACCCAACACAAGATGCTCTTGACTGGCAGCTAGAAGGTTCTGCCTCTTTCTTCCCACCATTCTTGGATTATCCATATCCCATTCAAGATTATCACTTCTGGGATCAAAACCAAGACATAATCTGCTACCATAACCAAATTGATGCCGGTACCGGATCCCCGAATGCCGCAAACGGCGCTGCCGCCGTGGTGGCCACCACTGCCACCAGTACAACCTGCACAACACCCTCGGATCCTGAACCTTACAGTTACAACAACCTACCAGTTTCAGACTTGCCGACGAAGAAACGAAACTCCAGCGACAATGATTGCTCGGTCCAAAAGCCTTCACAGAGCCACAGAGCGAAGAAATTCAAGGCTCGTTCAACTAATGAAGTTGACAATGGCGATTCAGTTGCCGAAGGGACTAGTGTTAGAAAATCTGGTGGGAACAAAAAAGGTGGAGGCAAGAACAATGGCAATAACTGTAACAATGGAAACAAAGAAGGTAGGTGGGCGGAACAGTTGCTCATCCCTTGTGCTTTAGCTATAAATGCTAAAAATTTAAATCGTGTACAGCACCTCTTGTATGTGCTCCATGAGCTAGCCTCCCCTACGGGCGATGCGAATCACCGACTCGCGGCACACGGACTCAGCGCACTCACACACCATCTATCCTCATCGTATTCGTCTTCATCTTCTTCTACCATAACAAACGATTCAGGGACTAAGACTTTTGCATCAGTGGACTCCAGATTCTTCCATAAGACACTCCTCAAGTTCTATGAGGTTAGCCCCTGGTTTTCTTTTCCTAATAACATTGCAAACGCTTCAATCCTTCAATTCCTTTCCGAAGAAGAATCAAGTAGTTCGCGTACTCTTCACATCCTTGACATTGGAGTCTCCCATGGTGTCCAATGGCCTACTTTTCTTGAGGCGTTAACCCGAAGACCTGGCGGACCTCCTCCTCTGGTTCGCCTAACCGTTGTAACCGCTTCCTCCAATGAAAATGAACAGAACATGGAAACTCCTTTCTCTGTAGGTCCACCCGGTGATAACTTCTCTTCTTACCTCCTTGGTTATGCTCAAACCATTAAGCTCAATTTGCAGATAAACAGGATTGATAATCTTGAATTACAGACGCTGAATTCGAAGAGTATCGACACATCTTCGGATGAAACATTCATTGTCTGTGCGCAGTTTAGGCTCCACCACTTGAATCACAGAAATCCTGACGAGAGGAGCGAGTTTCTGAAGGCTTTGAGAAGCATGGAGCCTAAAGGAGTGATACTAAGTGATAACAACGTTGAATGCAGTTGCAATGGCTGTGGAAACTTCGCGTCCGGATTCTCCCGGAGAGTGGAGTACTTGTGGAGTTTCTTGGATTCGACGAGTGTTGCGTTCAAGGGCCGGGAGAGTGACGAAAGGAGAGTGATGGAAGGCGAGGCGGCGAAGGCCCTGACCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGA 1494 0.4639 MNMEPNPTQDALDWQLEGSASFFPPFLDYPYPIQDYHFWDQNQDIICYHNQIDAGTGSPNAANGAAAVVATTATSTTCTTPSDPEPYSYNNLPVSDLPTKKRNSSDNDCSVQKPSQSHRAKKFKARSTNEVDNGDSVAEGTSVRKSGGNKKGGGKNNGNNCNNGNKEGRWAEQLLIPCALAINAKNLNRVQHLLYVLHELASPTGDANHRLAAHGLSALTHHLSSSYSSSSSSTITNDSGTKTFASVDSRFFHKTLLKFYEVSPWFSFPNNIANASILQFLSEEESSSSRTLHILDIGVSHGVQWPTFLEALTRRPGGPPPLVRLTVVTASSNENEQNMETPFSVGPPGDNFSSYLLGYAQTIKLNLQINRIDNLELQTLNSKSIDTSSDETFIVCAQFRLHHLNHRNPDERSEFLKALRSMEPKGVILSDNNVECSCNGCGNFASGFSRRVEYLWSFLDSTSVAFKGRESDERRVMEGEAAKALTNXXXXXXXXXV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00798 497 Pfam GRAS domain family 172 480 IPR005202 -
Adu09g00798 497 MobiDBLite consensus disorder prediction 76 166 - -
Adu09g00798 497 ProSiteProfiles GRAS family profile. 162 497 IPR005202 -
Adu09g00798 497 MobiDBLite consensus disorder prediction 76 100 - -
Adu09g00798 497 MobiDBLite consensus disorder prediction 152 166 - -
Adu09g00798 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 488 IPR005202 -
Adu09g00798 497 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 488 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00798 Adu-Chr9 11678946 11680904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00798 5 487 GRAS Transcription Factor Family AT3G13840 46.939 3.24e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu09g00798 GRAS 1.3e-58 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00798 - - aip:107615113 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00798 09 11678946 11680904 Adu09g00798 09 11678946 11680904 ECH
Adu09g00798 09 11678946 11680904 Adu08g01116 08 20015332 20016784 PCT