Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00771 ATGAATGAGAACAAGCTTGATTTTCATTCTGAATATGGCAACCATTCTTCTTGTCAATATTTTGGTATTAGACAACAACCTTGGAACATGGGACCATGCAATAACCAACCCCTCAGCGCGACTTGCGTCGGCGTTGGAGTTGGCAGAGGAAGAGGAGGAGGAGGAGAACAAGAAGTAGTACTACCATACTCGGCTCAAGCCAAACCATCTAGCACCATCATAAGCCGATTCGAGTCGCCGGCTTCGGCCTTTTACGCGACGGAAATCTTCATGGGGTTCCCACAATATGATTCCCATCAAGTTGGTAATCCATCCAATTTGATGCCGCATCAACTCTCCATCAAGAACATTAATAATGATATGGAGTTCCCTCTCTATCAATCTTCAAAGGAAAGCCTCTTCTTTGATTCATCAGTTAATGACCAAAATAGCCCCAACAACTTTGAGTTGCCAAACACCTTGCAAGCAATAAAATCTCAATGGAATGGTGATCAATGTAATGGATCACCTGAAAAATCTAATAAAATTCCATGTGGGAATTTTCCTGCCAGCAATTTCCTTCCTATTGAACAACATAAGTTGTTCAATGATGATGCTGCCCCAGTCACTAGGAGCATATCAATTCCTAAAGCAAATCAAGAATCTACGGTTGCTTGTGGCTCATTCAATTCCCCTGTTCAACAGCTGAGTTTCTCTTCTCCTCAAGAGAAGCTTTCTCCGACAATTTCGGCCGGAAACCTTGTCGGTAATGGACCAATAGCATCGAGTAAGACGCGTATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAATGTGTCAATAGACTAGGAGGCGCAGAGAAGGCGACGCCGAAAGCGATACTAAGGCTGATGGATTCAGATGGATTGACAATCTTCCATGTTAAGAGTCATTTGCAGAAATACAGAATTGCAAAGTATATGCCAGAATCAACTCAGGGGAAATCTGAGAAAAGAACCAGCGCAGAGAATGTGCATCTTGATGTCAAAGCTGGCTTGCAGATTAAAGAGGCACTTCAGCTGCAATTGGATGTGCAGAGGCGTCTTCATGAACAGCTAGAGATTCAGAGAAAATTACAGTTGCAAATTGAAGAACAAGGAAAGCAGCTGAAGATGATGTTTGACCGGCAGCAGAAGTCAAATAATAGTGAAAGAAGTTCTAAAGATAATAATAATGATGATAATGAGACATCAGTTATTTCAGCGCTTACAAAGAATGATAGGTTTAAGGAGGCTGTGGAGTTGTTCTATAAGATTCATAGAGGTTGCGGGTTAGCACTGGATGGTTTTACCTTTGGGACATTGTTGGCTGCTTGTGGTAACTTGGGGTGGTTGAGACAGGGGAGGGAGGTGCATGCTAAGGTTGTTACTTCTGGGATATGTGGGAATGTGGTTGTTGAGAGTAGTCTTTTAGATATGTATGGTAAGTGCGGTTCGGTTGGCCAGTCTAGGATTGTTTTTGATAGGACGAACAATAAGAATTCAGTGTCATTGACTGCTATGCTCGGCACGTATTGTCATAATCGAGAGTATGAGACTGTGCTCAATCTTTTTAGAGAGAATGGGATTGTGGATATTTACAGCTTCAGGACTATTCTTCGCGCGTTTTCGGGATTGGCTGCTGCGAGACAGGGAAAGGAGGTTCATTGTCACAAAACTCACTTCAATTCATTTCTCTTATTTTCTCTTAACTCACATTCTTACTTGAGAGTCGGAGTGCTTTTTGCCGGTGCTCTCGCCGCGGTTTTCCAACTCAGCAGACGTATAGATCCTCCACCCGAACTCGATCAACGCCAGAGGAGATCACCATACCTCGGCAGCATACGGACGGAACTGTTGTTCCTGAGTATGCAAATTCGAAATCTGATAACATGGAATTCAATGATTGGCGGGTTTGCACAGAATGGAAGAGGGATGGTAGCATTCGCCTTGTTTGAGGATATGGTCAAAGGAGGGATGCAGCCTAATTATATCATTTTTATTAATGTTCTCTTTGCTTGCAGCAGTCATACTGGTTTGGTTAATGAAGGAAGAGAATATTTTACTTTAATGACAAAGAAATATGAGATTCAGCCTGGAGTTGAGCATTACAATTGCATGATTGATCTTCTAGGTCGCGCCGAACTGATAGAGGATGTTGAGATTTTGTTGGAAAATTCGGATTGTAGAGAATATCAGTCACTTTGGGCAGTGCTTTTTGGAGCTTGCACTAGcttcgtcggatccttaccgccgaacccgttcttgccgccgccgttggaatcacgaacaggggaaggagaagacgcgggccagtgccgcgaggaggagtgcgacccgctacacaacgctgcgccgccgtgtgttgttgccgtcgccgagctcccatggttgccgccgGCAAGATTCAAATGCCGCCGCCTTGACGTCCTACCGCTCGTGTCATCGTCGCCAGCTTCGTCGGATCCTTGCCGCCGAACCCGTTCTTACCGCCGCTGCTGGAATCACGAACAGGGGAAGGAAAAGACGCGGGCCAGTGCCGCGAAGAGGAGCGCGACCCGCTACGCAACACTGCGCCGCCGTGTGTTTTTGCCGTCGCCGAGCTCCCGTGGTTGCCGCCGGCAAGGTTCAAAGAGAGAGAAGCTAGAGGAGAGAGAAAGATCGACGAAGGGGGTTTTGTTCGAGCGGCCGTGCCTCCACCGCCTTTCACCGCCGCAGATTCGCCACCATCCACCGCGCCGCACCATGCCACGTTGCCGCTGTTCTTTACTGCGCAGCCACCGCCACGCCTTGTCGTCGCCAGAGTTGCCACCGCCGCTTCTCACCACCGAGGAGAAAGCTTGCCTACGTTGCTGCCTTCCGGGCCAGATTCACCGTTATAGTTTCTCCGTTTTCCATTCTCTTGTTTCTTTTCTGAGGGTGTTTGGAATACAAATCATGACGTAG 2946 0.4328 MNENKLDFHSEYGNHSSCQYFGIRQQPWNMGPCNNQPLSATCVGVGVGRGRGGGGEQEVVLPYSAQAKPSSTIISRFESPASAFYATEIFMGFPQYDSHQVGNPSNLMPHQLSIKNINNDMEFPLYQSSKESLFFDSSVNDQNSPNNFELPNTLQAIKSQWNGDQCNGSPEKSNKIPCGNFPASNFLPIEQHKLFNDDAAPVTRSISIPKANQESTVACGSFNSPVQQLSFSSPQEKLSPTISAGNLVGNGPIASSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMDSDGLTIFHVKSHLQKYRIAKYMPESTQGKSEKRTSAENVHLDVKAGLQIKEALQLQLDVQRRLHEQLEIQRKLQLQIEEQGKQLKMMFDRQQKSNNSERSSKDNNNDDNETSVISALTKNDRFKEAVELFYKIHRGCGLALDGFTFGTLLAACGNLGWLRQGREVHAKVVTSGICGNVVVESSLLDMYGKCGSVGQSRIVFDRTNNKNSVSLTAMLGTYCHNREYETVLNLFRENGIVDIYSFRTILRAFSGLAAARQGKEVHCHKTHFNSFLLFSLNSHSYLRVGVLFAGALAAVFQLSRRIDPPPELDQRQRRSPYLGSIRTELLFLSMQIRNLITWNSMIGGFAQNGRGMVAFALFEDMVKGGMQPNYIIFINVLFACSSHTGLVNEGREYFTLMTKKYEIQPGVEHYNCMIDLLGRAELIEDVEILLENSDCREYQSLWAVLFGACTSFVGSLPPNPFLPPPLESRTGEGEDAGQCREEECDPLHNAAPPCVVAVAELPWLPPARFKCRRLDVLPLVSSSPASSDPCRRTRSYRRCWNHEQGKEKTRASAAKRSATRYATLRRRVFLPSPSSRGCRRQGSKREKLEERERSTKGVLFERPCLHRLSPPQIRHHPPRRTMPRCRCSLLRSHRHALSSPELPPPLLTTEEKACLRCCLPGQIHRYSFSVFHSLVSFLRVFGIQIMT 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00771 981 Coils Coil 343 363 - -
Adu09g00771 981 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 257 312 IPR006447 GO:0003677
Adu09g00771 981 Gene3D Tetratricopeptide repeat domain 616 678 IPR011990 GO:0005515
Adu09g00771 981 Gene3D Tetratricopeptide repeat domain 679 745 IPR011990 GO:0005515
Adu09g00771 981 Pfam Myb-like DNA-binding domain 261 310 IPR001005 -
Adu09g00771 981 Pfam PPR repeat family 628 663 IPR002885 -
Adu09g00771 981 MobiDBLite consensus disorder prediction 866 886 - -
Adu09g00771 981 Gene3D - 256 315 - -
Adu09g00771 981 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 254 314 IPR017930 -
Adu09g00771 981 Pfam PPR repeat 404 427 IPR002885 -
Adu09g00771 981 Pfam PPR repeat 503 527 IPR002885 -
Adu09g00771 981 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 50 404 - -
Adu09g00771 981 TIGRFAM PPR: pentatricopeptide repeat domain 630 663 IPR002885 -
Adu09g00771 981 Pfam MYB-CC type transfactor, LHEQLE motif 340 387 IPR025756 -
Adu09g00771 981 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 50 404 IPR044848 GO:0003700
Adu09g00771 981 Gene3D Tetratricopeptide repeat domain 402 565 IPR011990 GO:0005515
Adu09g00771 981 MobiDBLite consensus disorder prediction 383 404 - -
Adu09g00771 981 SUPERFAMILY Homeodomain-like 255 311 IPR009057 -
Adu09g00771 981 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 628 662 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00771 Adu-Chr9 10851057 10861720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00771 235 394 G2-like Transcription Factor Family AT3G04450 51.190 1.72e-46 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Adu09g00771 Myb_DNA-binding 8.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00771 - - aip:107619706 780.4