LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu09g00753	ATGCTTTTCCCTTCAATGGGACTCCTTTTCTTTTATGTATTCTTTGTGTGGCTGAAAGCTTCATTAGCCACCAACATTTTAGGAAATGAGACCGATGTTATAGCATTGTTTCGGTTTAAAGAGTCAATATCCAATGATCCATATGGAGTTTTAAGCTCATGGAATACTTCAAGCCACTTCTGCAACTGGCATGGAATCACATGCAGCATTAAGCATCAAAGAGTGCAACACTTGAGCCTTCAACTATGTCAGTTGCATGGCACAATATCTCCATACATTGGAAATCTCTCTTTCTTGCGAACTCTCAACCTTGCGAGCAATAGCTTCTATGGAGAAATCCCTCGGGAGATAGGAGAGTTTCCTGTCAGTTTGGCTAATTGCTCGGAGCTAAGGCTTCTAAACATGTCGAGTAACAATCTCTACGGCCGAATACCAATGGAGATTGGCACTCTTAAGAAGCTTGAAAAGTTGAGTCTTAACAAGAATAACTACTCTGGAGAAATTCCATCTTCCATATGGAATATCTCTTCTCTAAGTATTCTTTCTATGGGTTATAATTACTTGGAAGGCAAGATACCTGAAGAAATTGGAAAATTAAAAAGCTTATCAGGTTTCGCCATTGGTGCCAATAAACTGTCCGGGGAGCTTCCTTCTTCGCTTTACAATCTGTCCTCGCTCGCTATTTTCTTTGCTGCAGAAAACCAGTTTCATGGCTCCCTTCCATCTGACATGTTCTCCAACCTCATCAGTCTGCAAGAGATTGGCATTGGAGGGAATCAAATTTCAGGTCCAATCCCAACTTCCATTTCAAATGCATCCTCACTTCAACTTTTTGATATTGGCTATTGCAGTTTTGTTGGAAAAGTTTCAAATCTAGGAAACCTGAAGGATCTTTATTGGCTAAATTTAAACTACAACCATCTTGGTAGTAATTCAGCTCTAGACTTGGATTTTATAACATCTTTGGTTAATTGTACCGAATTGGAAAGTTTGGTTTTGAGTTCGAACAATTTCGGAGGTGTTTTACCCAACTCCATAGGGAATTTGTCAGCTCAACTCACTGAAATAAGTCTTGATTTTAATCAAATACATGGAACTATCCCTGAAACTATATGCAATAACACAAATTTAATTGATTTGGATTTGGAATACAACCACTTTACTGGGTTTATTCCAAATTCTTTTGGAAAGTTTCAGAAAATGCAATTATTGGGTTTGAGTGCAAACAACCTTATGGGTGAGATACCTATCTCTTTGGGTAACCTCACTCAACTGGTTGAAATAAGCATTTCAAAAAATATGTTTTATGGGAAAATTCCACCAAGTATTGGAAATTGGCAAAACTTGTTGTACTTGGATTTTTCAGGAAACAATTTTAGTGGTGCTATACCAGTGGAAGTTTTTAGCCTTTCATCCTTGTCCACAAATCTGAACTTATCTCATAATTCACTGAATGGCACTCTTCCTGTTGAGGTTGGAGCTCTTGGAAACCTTGGAACTTTGGATATCTCCAATAACTCTCTATCTGGGCAGATTCCTATGACTATTGGAAAGTGCACACGTATGGAATATTTAGACTTACATGGTAATTCTTTCAGTGGCATGATACCTTCATCAATAGCTTCATTGAAAGGCCTTTCTCATTTGGATCTCTCGCGAAATAACTTGTCCGGATCAATTCCAACAGATATGCAGAGGCTTTCTTTTCTAACATATTTGAATGTATCTTTCAATATGCTAGAAGGGAAGGTACCATTGGAGGGTGTATTCAAGGATGCAACTGCAATTTCAATTGTTGGTAATAATAAGCTTTGTGGAGGTGTCTTACAGTTACATCTTGCACCATGCCCTGCCAATGTTATGGCAAGAAGCAATCACCATAATTTGAAGCTAGGCATAATTGTTATTTGTGTGGTTGTATGCCTTATTTTGCTTTCAATTGTTGTTTTCTTGAGCAAGAAGAAAAAAAGAACATCATCTTTGACAGCATCAACAAATCAGTTATCAATGGTGTCATACCAAATCCTACATCATTCAACACAGGGGTTTTCTACCAGTAACTTGATTGGATCTGGTAGCTTTGGTTCCGTGTACAAAGGATTCCTTGAATCCGAACACAAGTTTGTCGCCATAAAGGTGATAAACCTTCAAATGAGTGGAGCTCACAAGAGTTTCATTGCTGAATGTAATGCTCTAAAATTTATCAGGCATCGAAATCTGGTGAAGATTTTAACATGTTGCTCGAGCATAGATTATAGTGGCCAAGAATTTAAAGCATTAGTGTTTGAGTACATGCCTAATGGAAGCTTAGAAAAGTGGTTGCATCCTAGTGCTGAAATCACAGATAGGCTATATACATTAGACCTTACTCAAAGACTAAATATTGTTGTTGATGTGGCTTCTGCATTACATTATCTTCACTATGGATGTGAACAACCTGTTGTTCATTGTGATCTAAAGCCAGAGAATGTGCTTCTTGATGATGACATGGTTGCTCATGTGACTGATTTTGGATTAGCAAGGCTTCTCTCAGTGACTAATGGTGATCCTCATAACCAATCTAGCACAACTGTGTTCAAGGGAACTATTGGATATGCTCCTCCAGAGTATGGAATGAGTTGTGAGGTGTCGATGCAAGGTGATGTGTATTCTTTTGGAATTCTAGTATTGGAAATGGTAACTGGAAGGAGGCCAATGGAAGAAATGTTTAAAGATGATAACAATCTTCATAACTATGTGAAGATGGCATACTCACACAATCTTCTAGAGATTATGGACTCAACTCTTTTGCCAAAACAAACAGGAAAAGAAGAAAAATACACAAAGAAGCTAACCATGTGTGTATTTTCTCTAATTAGAATTGGACTTGCTTGTTCAGTTGAATCCCCGAATGAAAGAATGAACATGGCAGATGTCACTAGGGAGCTAAACCTTACCAAAGATGTGTTTCTTCAAGATTGA	2961	0.3793	MLFPSMGLLFFYVFFVWLKASLATNILGNETDVIALFRFKESISNDPYGVLSSWNTSSHFCNWHGITCSIKHQRVQHLSLQLCQLHGTISPYIGNLSFLRTLNLASNSFYGEIPREIGEFPVSLANCSELRLLNMSSNNLYGRIPMEIGTLKKLEKLSLNKNNYSGEIPSSIWNISSLSILSMGYNYLEGKIPEEIGKLKSLSGFAIGANKLSGELPSSLYNLSSLAIFFAAENQFHGSLPSDMFSNLISLQEIGIGGNQISGPIPTSISNASSLQLFDIGYCSFVGKVSNLGNLKDLYWLNLNYNHLGSNSALDLDFITSLVNCTELESLVLSSNNFGGVLPNSIGNLSAQLTEISLDFNQIHGTIPETICNNTNLIDLDLEYNHFTGFIPNSFGKFQKMQLLGLSANNLMGEIPISLGNLTQLVEISISKNMFYGKIPPSIGNWQNLLYLDFSGNNFSGAIPVEVFSLSSLSTNLNLSHNSLNGTLPVEVGALGNLGTLDISNNSLSGQIPMTIGKCTRMEYLDLHGNSFSGMIPSSIASLKGLSHLDLSRNNLSGSIPTDMQRLSFLTYLNVSFNMLEGKVPLEGVFKDATAISIVGNNKLCGGVLQLHLAPCPANVMARSNHHNLKLGIIVICVVVCLILLSIVVFLSKKKKRTSSLTASTNQLSMVSYQILHHSTQGFSTSNLIGSGSFGSVYKGFLESEHKFVAIKVINLQMSGAHKSFIAECNALKFIRHRNLVKILTCCSSIDYSGQEFKALVFEYMPNGSLEKWLHPSAEITDRLYTLDLTQRLNIVVDVASALHYLHYGCEQPVVHCDLKPENVLLDDDMVAHVTDFGLARLLSVTNGDPHNQSSTTVFKGTIGYAPPEYGMSCEVSMQGDVYSFGILVLEMVTGRRPMEEMFKDDNNLHNYVKMAYSHNLLEIMDSTLLPKQTGKEEKYTKKLTMCVFSLIRIGLACSVESPNERMNMADVTRELNLTKDVFLQD	986

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu09g00753	986	Pfam	Leucine rich repeat N-terminal domain	30	69	IPR013210	-
	Adu09g00753	986	Gene3D	Ribonuclease Inhibitor	309	616	IPR032675	-
	Adu09g00753	986	Pfam	Leucine rich repeat	521	580	IPR001611	GO:0005515
	Adu09g00753	986	Pfam	Leucine rich repeat	352	411	IPR001611	GO:0005515
	Adu09g00753	986	PANTHER	LRR RECEPTOR-LIKE KINASE	19	984	-	-
	Adu09g00753	986	ProSiteProfiles	Protein kinase domain profile.	683	984	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g00753	986	SUPERFAMILY	L domain-like	30	308	-	-
	Adu09g00753	986	SUPERFAMILY	L domain-like	352	606	-	-
	Adu09g00753	986	CDD	STKc_IRAK	689	977	-	-
	Adu09g00753	986	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	814	826	IPR008271	GO:0004672\|GO:0006468
	Adu09g00753	986	Pfam	Protein kinase domain	685	926	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g00753	986	PANTHER	OS04G0122200 PROTEIN	19	984	-	-
	Adu09g00753	986	ProSitePatterns	Protein kinases ATP-binding region signature.	689	712	IPR017441	GO:0005524
	Adu09g00753	986	SUPERFAMILY	Protein kinase-like (PK-like)	657	977	IPR011009	-
	Adu09g00753	986	Gene3D	Phosphorylase Kinase; domain 1	646	764	-	-
	Adu09g00753	986	Gene3D	Ribonuclease Inhibitor	192	291	IPR032675	-
	Adu09g00753	986	Gene3D	Ribonuclease Inhibitor	31	191	IPR032675	-
	Adu09g00753	986	SMART	serkin_6	683	984	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu09g00753	986	Gene3D	Transferase(Phosphotransferase) domain 1	765	983	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu09g00753	Adu-Chr9	10636624	10639808	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu09g00753	22	985	Receptor kinase-like Gene Family	AT3G47570	45.427	0.0	806

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XII-1	Adu09g00753		Pkinase	5.4e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu09g00753	-		-	ahf:112708871	1471.06