Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00727 ATGAACATCGATGACAATAAGAACTTAAAAGAGTCTATCGAATGTGATGAGCTGTGTTTTGGGTATGATAGTAGTTCTGATAAGGAGGAGGAAGATCTTATCAACAATGAGGGTAAATTTAGTGAATCCATGGAGGTATCGAATTGTAGCTATAAAATTCAAGAAGTTGAGAAGAAGTTAAATGAATTAAGCTATGATGACATGTGGGGTATTAAGTTTGATACTGTTGATCAATGTTGTGATTTTTATAGAAATTATGCTAGAGTGCACGGTTTTGTTGCGAGGCTTGACGAAAAAGGACAAGATTTCAATGGAAACCTTAATATGCGACAGATGGTTTGTAACAGAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAACAGGAAAAAGGATCACAAGCCAATCACACGCGTAATGTTTCAAGCAAAGATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAGTTCATTTCaccatga 546 0.3626 MNIDDNKNLKESIECDELCFGYDSSSDKEEEDLINNEGKFSESMEVSNCSYKIQEVEKKLNELSYDDMWGIKFDTVDQCCDFYRNYARVHGFVARLDEKGQDFNGNLNMRQMVCNREGTRRKKYLEMENRKKDHKPITRVMFQAKIRFHYDLILQKWRVTKFEETHNHDLIPPKYIQFISP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00727 181 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Adu09g00727 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 171 - -
Adu09g00727 181 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00727 Adu-Chr9 10190621 10191166 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g00727 FAR1 8.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00727 - - aip:107607226 367.466