Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00700 ATGGCTAGTATCCTTTGGCACTTTGTTTTGCCCATTTTTCTTGCCACCCTTTTCTCTCCATACCCTACTTATGGTGCCAAGCAATCCAAAATAATTGGCATGAAAATGAATGTGATTGACCAGTGCTGGAGACGGGATCCCCAATGGAGGAGCCACCGCGCGCAACTCGCAAACTGCTCCATTGGCTATGCTGGCAAGATGATGAACAACATTGGCAGTGACCTCATCTATTATGAAGTTATAGACCCTAGTGATGACCCCATAAACCCTAAGCATGGTACCTTGCGATATGGAGCTTCTGTGATTCAACAAAAAGCTTGGATCACATTTAAAAGAGACATGAAAATTACATTGGCAAAACCCCTTCTCATTAGTAGCTTTACCGCCATTGATGGCCGCGGCGCCAACGTCCACATTGCTCATAACGCATGCTTTATGATCTTTAAGGCGACGAACGTAATAATCCACAACGTTCGGATCCATGATTGTAAAGCACAAGCTCCGGGATTGGTGATGGGTCCAAATGGGAAGGTGATTTCATTAGGTCAAGTTGATGGCGATGCCATTAGACTAGTCACTGCTTCGAAGATTTGGATTGATCATAATACACTTCAAGATTGTGAAGATGGTCTTCTTGATGTTACACGGGGTTCCACTGATGTCACCGTCTCCAATAACTGGTTCCGGAACCAAGATAAGGTTATGCTTCTTGGGCATGATGATGGATATATTAGAGATCAGAATATGAAAGTTACTGTTGTCTACAATCATTTTGGACCAAATTGTAACCAGCGTATGCCAAGGATCCGTCATGGATATGCACATGTAGCAAACAATCTTTATCAGGGATGGATGCAATATGCTATTGGTGGAAGCATGGGACCAAGTCTCAAAAGCCAATCTAACCTCTTCATAGCCCCTGAATCTGGGAACAAGGAGGTGACATGGAGAAAAGGCAACAGCGAAAATGGGAACATGTGGGAATTCCATTCAGTTGGGGATGCTTTTGAAAATGGAGCTTCTTTCACAGTAACAAAAGGAGGACGTGTGCCAAAGCCAAATTATAGTGAGGAACAATATTTTAAGGTTCTTGATGCTAAATCTGTCAGATTTTTGACAAGATCCTCTGGC 1131 0.4324 MASILWHFVLPIFLATLFSPYPTYGAKQSKIIGMKMNVIDQCWRRDPQWRSHRAQLANCSIGYAGKMMNNIGSDLIYYEVIDPSDDPINPKHGTLRYGASVIQQKAWITFKRDMKITLAKPLLISSFTAIDGRGANVHIAHNACFMIFKATNVIIHNVRIHDCKAQAPGLVMGPNGKVISLGQVDGDAIRLVTASKIWIDHNTLQDCEDGLLDVTRGSTDVTVSNNWFRNQDKVMLLGHDDGYIRDQNMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYQGWMQYAIGGSMGPSLKSQSNLFIAPESGNKEVTWRKGNSENGNMWEFHSVGDAFENGASFTVTKGGRVPKPNYSEEQYFKVLDAKSVRFLTRSSG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00700 377 SMART amb_all 113 310 IPR002022 -
Adu09g00700 377 PRINTS Pollen allergen Amb family signature 327 351 IPR018082 -
Adu09g00700 377 PRINTS Pollen allergen Amb family signature 358 377 IPR018082 -
Adu09g00700 377 PRINTS Pollen allergen Amb family signature 185 206 IPR018082 -
Adu09g00700 377 PRINTS Pollen allergen Amb family signature 287 306 IPR018082 -
Adu09g00700 377 PRINTS Pollen allergen Amb family signature 59 76 IPR018082 -
Adu09g00700 377 PRINTS Pollen allergen Amb family signature 121 137 IPR018082 -
Adu09g00700 377 PRINTS Pollen allergen Amb family signature 265 284 IPR018082 -
Adu09g00700 377 PANTHER PECTATE LYASE 18-RELATED 25 377 IPR045032 GO:0030570
Adu09g00700 377 Gene3D - 36 377 IPR012334 -
Adu09g00700 377 Pfam Pectate lyase 126 304 IPR002022 -
Adu09g00700 377 SUPERFAMILY Pectin lyase-like 31 354 IPR011050 -
Adu09g00700 377 PANTHER PECTATE LYASE 25 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00700 Adu-Chr9 9696463 9728691 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00700 67 319 Polysaccharide Lyase AT5G09280 72.727 1.88e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00700 K01728 - gmx:100780437 634.795