Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00694 ATGAAGCACGAGGCTGAGGCTGAAGCTAAGGTTCTCCCTCTTGAATTGGTGGAGAAAATCCTACTATGGTTGCCGGTAAAATCCCTGATTCGGTTCAGGCTTTTGTACTTGTCGAGTGAGGTTCCTGAGGCTCGTTGTGTAGATCTGGAAGCTCCGATTTGCGGCGATTACGCGCTTCAGCTTCCTCTATGTTGTCGTCATTTCAGCCTTAGTATTCTAGGTTCATCCAGGGGCTTCATACTGCTGCGCATTCATGTTTATGGCGCACCGCTCCTTCTGTGGAACCCTGTCACTGGTTCTTACAGATCAGTGCCATACCCTGTTGTTGACCCTGATGCTTCTTGTTGGACGGATTCAATTAATTTATGGGGTGGTCTTGGTTATGATGAATCCAGTGATGATTATTTAATAGTAGTAGGATGGGGTGACGGACATGAATGGAGACCTCAGTGGGAGTATTTCTCTGTTAGAACCAATTCCTGGAAAAAAATTGAGTGTGGCCATCTTCCTCCCCATTTGGTTACCATTGAAAGTGCACTGTTTTGTAATGGGGTTCTTTATTGGTTGGCCGTTAAAGATATGGAAGTGAATTTTGTGATTGTTGCCTTCGACTTAGCCGGAAAGCATCTATCATTGGTGTCATTTCCAACATCAGGCGGTTCCGGCCGGCTGTTAAATTTGTTTGCTGGATGCCTTGGGCTATATTACTTGAACTTCACGGAAGACCACCAGAAGTTTGAGATCTGGGTAATGAAAGAATTATCTTGGACTAAGCTCAATGTTGTGCTTCCTTATGCTCATGGAATCCACCCTTTGTGTTTAACTAAAGGTGAACTTGTTGGCATAAAAAACAATGAAGTTTGCTGTCACTTCCGGACGAGTTTGGCTGCACAGGGGAAGAACAAGGAAAGTAGGGTGGTCACACATGAGATATCAAAAGTTGTTTGTCAGGCTCTGGTGTGCATGTTTCAGCAAGTTAGGAGCATCTTTGATAAGAGTCCAGCGACAATGGTGGCCGCCAAGAAGACGAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCCCTTGTCATGAAGAGTGGCAAATACACCCTCGGTTATAAGACCGTTCTCAAATCCCTCAGAAACTCCAAAGGTAAGTTGATTATCATTGCTAACAACTGTCCACCTTTGAGGAAGTCAGAGATTGAGTACTATGCCATGTTGGCAAAGGTTGGCGTGCACCATTACAATGGGAACAACGTCGACTTGGGCACCGCATGTGGAAAATATTATAGAGTTTGCTGCCTTAGTATTATTGATCCTGGTGATTCTGATATCATTAAGACACTCCCTGGCGAACAGTAA 1347 0.4484 MKHEAEAEAKVLPLELVEKILLWLPVKSLIRFRLLYLSSEVPEARCVDLEAPICGDYALQLPLCCRHFSLSILGSSRGFILLRIHVYGAPLLLWNPVTGSYRSVPYPVVDPDASCWTDSINLWGGLGYDESSDDYLIVVGWGDGHEWRPQWEYFSVRTNSWKKIECGHLPPHLVTIESALFCNGVLYWLAVKDMEVNFVIVAFDLAGKHLSLVSFPTSGGSGRLLNLFAGCLGLYYLNFTEDHQKFEIWVMKELSWTKLNVVLPYAHGIHPLCLTKGELVGIKNNEVCCHFRTSLAAQGKNKESRVVTHEISKVVCQALVCMFQQVRSIFDKSPATMVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00694 448 Pfam F-box associated domain 181 267 IPR013187 -
Adu09g00694 448 SUPERFAMILY Galactose oxidase, central domain 91 282 IPR011043 -
Adu09g00694 448 Hamap 50S ribosomal protein L30e [rpl30e]. 348 445 IPR000231 GO:0003723|GO:0003735|GO:0022625
Adu09g00694 448 ProSitePatterns Ribosomal protein L30e signature 2. 416 436 IPR022991 -
Adu09g00694 448 Gene3D - 338 444 IPR029064 -
Adu09g00694 448 PANTHER 60S RIBOSOMAL PROTEIN L30 337 448 - -
Adu09g00694 448 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 349 441 IPR004038 -
Adu09g00694 448 SUPERFAMILY L30e-like 349 442 IPR029064 -
Adu09g00694 448 PANTHER RIBOSOMAL PROTEIN L30 337 448 IPR039109 GO:0003723
Adu09g00694 448 ProSitePatterns Ribosomal protein L30e signature 1. 360 384 IPR022991 -
Adu09g00694 448 TIGRFAM F_box_assoc_1: F-box protein interaction domain 86 266 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00694 Adu-Chr9 9626664 9631027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00694 337 448 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 86.607 6.56e-67 207