Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00660 ATGCAGGAAGGCACCTCGCTCCTCAACCCTAATCGCTCTTACATACCTCTAAGCACCGACGATCCCGGTAGCTCAAGTAAGGATCTAAATCTGGTTACAGTTGGGTTACCGCCAGCATGGGTGGATGTGTCTGAAGAAATATCAGCAAATTTGCAGCGCGCCAGAACAAAAATGGCAGAGTTGGCCAAGGCGCATGCAAAGGCTTTAATGCCATCATTTGGTGACGAGAAGAGATTGCAGAGACTTCCTGCTGGTGGGCCATCTGAGGATTCCAATGTGAGAAAGAATGTGCAGCGTTCTCTTGCTACCGACCTTCAGAACCTCTCTGTAGAACTCCGCAAGAAACAATCGACATATTTGAGGCGCCTAAGGCAACAAAAGGAGGGTCAAGACGGGGTTGATTTAGAGATCAACATGAATGGAAGTAAATCCACATATGAAGATGATGACCTGGATAATATGATATTTAATGAACATCAGATGGCCAAGCTGAAAAAAACTGAAGCATTCACAGTGGAAAGAGAAAAAGAAATTCAGCAGCAGATGCCATCCTTCCATTGGGAATTGAAAACTTTCTTACTCATAAACCCTGGAGAAAATGACATTCAGTACGTACAGGGTACAATTGTTGATAGAATAGACTACATCATTCAGAATGTAGCCACTACAGTTGAGGATGGCCTTAAACAGCTTCAGAAGGCAGAGAGAAACCAGAAAAAGGGGGGCATGCTTGTCTTAAGAGAGGACCAAGGAGTTTCGAAGTATCTAACGCATGTGTTCAGTGTTCTGGATGAAGAGATCCGAAAATGA 810 0.442 MQEGTSLLNPNRSYIPLSTDDPGSSSKDLNLVTVGLPPAWVDVSEEISANLQRARTKMAELAKAHAKALMPSFGDEKRLQRLPAGGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSTYLRRLRQQKEGQDGVDLEINMNGSKSTYEDDDLDNMIFNEHQMAKLKKTEAFTVEREKEIQQQMPSFHWELKTFLLINPGENDIQYVQGTIVDRIDYIIQNVATTVEDGLKQLQKAERNQKKGGMLVLREDQGVSKYLTHVFSVLDEEIRK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00660 269 Pfam SNARE domain 208 244 IPR000727 -
Adu09g00660 269 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 206 234 IPR000727 -
Adu09g00660 269 PANTHER SYNTAXIN 7 77 IPR045242 -
Adu09g00660 269 PANTHER SYNTAXIN 76 245 IPR045242 -
Adu09g00660 269 SMART SynN_4 31 124 IPR006011 GO:0016020
Adu09g00660 269 PANTHER BNAANNG02730D PROTEIN 7 77 - -
Adu09g00660 269 Coils Coil 44 64 - -
Adu09g00660 269 Gene3D - 37 182 - -
Adu09g00660 269 MobiDBLite consensus disorder prediction 72 94 - -
Adu09g00660 269 MobiDBLite consensus disorder prediction 1 26 - -
Adu09g00660 269 Coils Coil 217 237 - -
Adu09g00660 269 Gene3D - 200 242 - -
Adu09g00660 269 PANTHER BNAANNG02730D PROTEIN 76 245 - -
Adu09g00660 269 SUPERFAMILY t-snare proteins 35 180 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00660 Adu-Chr9 8584362 8588363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00660 5 246 SNARE and Associated Proteins AT3G05710 64.045 1.82e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00660 K08489 - gmx:100796741 350.517