Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00615 ATGGACGAGGGCCAAGAGATGGAGAGGTTCGACGATGATGACGACGACTATTATTCCAGCAAGAAACGCAGGAAGGACCTTTCCACGAAGCAGATTAAGGAAGGGGTGATGCGGAGGGAGAGGGAAAGGGAGTGGGAGAAATTGGAGAAGAAGAGGGGTCAGGGTCAGAGTTCGGATCAAGATGGGTTTGGTAATGCGGGGAAATTCTATAACAATGGAATAGGGATGAAGCTGTTGGAAAAGATGGGTTATAGAGGGGGCGGTCTTGGAAAGAATGAGCAAGGTATTGTGGCTCCTATCGAGGTGAAAATGAGGGCTAAGAATTCAGGTATTGGTTTTAGTGATGCAAGGGAGGTGCCGCCACCACCGTTGCCTGTTTTGCAGCAACAGAACAAAAGCACGGTGGGAGCAGTGCAGCCTGCGGCTAGCAGAACAAAGGAGAGGCTGTGGTCAAAGCAGTCACGGTTGAAGAAGAAGAAAGAGGAGGAAGTGTATGTTACTGCTGAGGAGTTGTTGGCAAGCAAGCAAGAACAGAATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAAGTTCGGGTTTATACAAATTTATCTGATTTAAATGCTGAGGAGAAAGCAAAGGAGGAGGATGTCCCAATGCCGGAACTTCAGCATAACGTTGGATTGATTGTTGGGTTGGCGGAGGCTGACATTCAAGAGATTGATAGAGATTTGAGGAGAGAAAGGGAGACAGCTCTCAGCTTGAAAAAAGAAAAAGAGAAGTTAGAATCTGAAGCAGCATTCCAAAAGCGTCAACTGGATAATATGGAGGAAATAATGAGCGTCTTGGACGAAGTAGGCGAAGAGAGCACTTCAGGAACACTAACATTAGATTTCCTTGCTAGATGCTTCACTGACTTGCATGAGAGATATGCCGATAGCTACAAGTTGTGTAATTTGTCCTGCATTGCTTGCTCATATGCTCCTCCTTTGTTTATTAGAGAGTTCCAAGGTTGGGATCCTCTTCGAAATCCATCTCATGGGTTGGAGTTGGTATCTACGTGGAAGACTGTCTTTGATGCTGTAAACTGGGAACAACTTATGCTTCGATTTATTGTGCCTAAGTTGCAACTTGTCTTGCAAGAGTTTGAAGTCAATCCAGCAAGTCAGAAGCTCGATCAATTTTTTTGGGTAATTAAATGGGCTTCTGTGATTCCAATTCATATCATGGTGGACATGATGGAGAAGTTCTTCTTCACAAAGTGGCTTCAGGTTTTGCATCACTGGTTGTGCTCAAATCCTAACTTTGAAGAAGTTATGAAGTGGTATAATGGATGGAAGGAGCTTATTCCAGAAGAACTATTGGCAAATGAAAGTATCCAATTCCAGATTAACCGTGGTTTAGATATGATGAGTCAGGCTGTTGATGGAATGGAGGTTGTCCAACCGGGTTTGAAGGAGAATATAAGCTATCTTTGGGTTCGTGAGCAACGACAATTTGAGGCTCAGCAAAAAGCAGCAAGCTATGCTCAACAGCAAGCTGCTGCAGCATTGGGTGGTGCCAACGCAGATGGTGTGCATGATTTGAGCTTGAAAGAAGTCATTGAGGCTCATGCCCAGCATCATGGTTTGTTGTTCAAGATTAAGCCTGGTAGAATGCACAACGGTCACCAAATATATGGGTTTGGTAATGTCAGCATAATAATAGACTCGCTACATCAGAAGGACTATTGGGCTTCTGTGGGATGCTCCATTATGCAATGCAGCAACACAGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTCCTCGGTCCAGAACCATGGAATGTTGCATATGTAGAGCCTAGCATCCGCCCCGACGATAGCCGATATGGAGAAAACCCAAATAGGCTCCAAAGACACACTCAATTTCAGGTCATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTATCAGCTTTAGGTAGTATTGATGTTACTGCTCATGATATACGATTTGTGGAGGACAATTGGGAGAGTCCAGTTCTTGGTGCTTGGGGTTTAGGCTGGGAAATCTGGATGGACGGGATGGAGATTACGCAATTCACCTACTTCCAGCAGGCAGGAAGTCTCCCGCTATCACCTGTTTCCGTAGAAATCACGTATGGCCTTGAGCGTATCATTATGTTACTACAGGGAGTTGATCATTTCAAGAAGATCAAATATTCCGATGGAATTACATATGGAGAGTTGTTCTTGGAGAATGAGAAAGAAATGAGTGCATATTACTTGGAGCATGCCAGTGTTGATCATGTTCAAAAACATTTTGATTTCTTTGAGGAGGAAGCTCGTAGATTACTTTCTTCAGGCTTAGCAATCCCTGCGTATGATCAGCTTCTAAAAACATCTCATGCTTTCAATATATTAGATTCCAGAGGCTTTGTTGGGGTGACGGAGCGTGCTCGATATTTTGGTCGAATGCGTAGTTTAGCTCGCCAGTGTGCACAACTTTGGTTGAAGACTAGGGAGAATCTTGGCTTCCCTCTTGGTTTCATCTCTGAACCTGATAATTTTGTATTGCCAAAAGAAGTTCTTGAGGCTGCTTGTGAGAAGGTGCATGATCAGTCAAGAGCATTTGTTCTTGAAATTGGAACAGAAGAGATGCCCCCTCAAGATGTTGTAGATGCAAGCAAGCAACTGAAAGATTTGATGCTGCAATTACTAGAGAAACAGAGGTTAAAGCATGGCAACATGCAAGTTTTTGGCACCCCACGCAGATTAGTGGTTGCCATTGAAAATCTTTCCACAAAACAAGCAGAAGTGGAGGTTGAGGTTCGAGGTCCTCCAGTTTCAAAATCGTTTGATCATGAAGGAAACCCAACAAAGGCCATTGAAGGATTTTCCCGTAGATACTCTGTTCCACTGGACTTGGTATACCGAAAGGTTGATGGAAAAACAGAATATGTTTATGCTCGTGTGAAGGAGCTTTCAAGATATTCTTTAGAGGTTCTGTCTGAAGATTTGCCTGCTACTATTTCTAAAATATCATTTCCAAAGACGATGAAATGGAATTCTCAGGTGATATTTAGTAGGCCTATCCGTTGGATTTTGGCTATGCATGGAGATGTAGTAGTCCCGTTTATGTTTGCTGGGGTATTGAGTGGAAACTTATCTCGTGGTCTTCGCAATACTTCTTCAGCTATCCTCCAGGTTGAAAGTGCAGAATCTTATTCAGTTGCAATGAAACATGCGGGAATCAATGTTGCAGTTGAGGACCGCAAGAAAATTGTTGTTCAGCAATCTAATGCATTAGCAGAAAGTGTAAATGGCCAAATTGTTATTCCAACAGGCTTGCTTGATGAGGTTGTAAATCTTGTTGAGGCACCTATTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTGGCCCTTCCAAAAGAACTTTTGAGCATGGTTATGCAAAAGCATCAGAAATATTTTGCTGTATGTGATGATGAAGGACAGCTGTTGCCTTATTTTATTGCTGTTGCAAATGGAGCAATTGATGAGACTACTGTGAGGAAAGGAAATGAAGCTGTCCTCAGGGCTCGCTATGAAGATGCCAAGTTCTTTTATGAGATGGACACTCGTAAAAAATTCTCTGAATTCCGGAAGCAACTTAAAGATATTCTGTTTCATGAGAAGCTTGGAACCATGTTGGATAAGATGACTCGTATAGAAAACATGGTGATTATGCTAAGTTGCATCCTGAATATTAGTGAAGATAAACAACAAATCATCCGGGATGCTGCCTCGCTTGCTATGTCTGATCTTGCCACTGCTGTTGTCACTGAATTCACCTCACTTTCAGGAATAATGGGGCGTCACTATGCCATTAGAGATGGATATTCAGAGCAGATTGCAGATGCCTTGTTTGAGATCACGCTTCCTAGATTTTCTGGGGACATGCTACCTAAGAGTGATGCTGGCATAGTTTTGGCCATTGCTGATAGATTAGACAGCCTGGTAGGTTTGTTTTCTGCTGGATGTCAACCTAGTTCTACAAATGACCCATTTGGTCTGCGAAGAATCTCCTATGGTCTTGTACAATTGTTGGTGGAAAAGAACAAAAACCTGAACTTGAAAGAGGCTCTGCAACTTGCTGCAGATGCACAATCCATCAAAGTGGATCCGCATGTAATAGATGATGTATATCAGTTTGTTACTCGAAGATTAGAGCAGTTTCTGGTTGACAAGGGAGTGAGTGCAGAATTTGTTCGTTCTGTCCTTGCTGAGAGGGCAAAATTTCCCAGTCTAGCAGCAAAGTCAGCATATAAAATGGAAGAATTATCAAGAGATACACTTTTCCCTAAAGTGGTTGAAGCATACTCTCGACCAACAAGAATTGTCCGTGGGAAGGAAGGCGAACTTAATATGACGGTGGATGAGGCTGCTTTTGAGACAAATGAAGAGAGAGTTTTATGGAGCACATTTTTGTCAGTTAAAGAGGGCATTAATCCTGGTCTTGACATTGATGATTTTGTTGAGATTTCATCTCAGCTAATACAGCCGCTTGAAGATTTTTTCAACAATGTCTTTGTTATGGTGGATGATGATAAGATCAGAAAAAACAGGCTAGCTATGCTAAAAGAAATTTCTGAGCTTCCAAGAGGAATAGCAGACCTCACAGTTCTTCCAGGATTTTAA 4677 0.4268 MDEGQEMERFDDDDDDYYSSKKRRKDLSTKQIKEGVMRREREREWEKLEKKRGQGQSSDQDGFGNAGKFYNNGIGMKLLEKMGYRGGGLGKNEQGIVAPIEVKMRAKNSGIGFSDAREVPPPPLPVLQQQNKSTVGAVQPAASRTKERLWSKQSRLKKKKEEEVYVTAEELLASKQEQNLEVVQKVYDMRGPQVRVYTNLSDLNAEEKAKEEDVPMPELQHNVGLIVGLAEADIQEIDRDLRRERETALSLKKEKEKLESEAAFQKRQLDNMEEIMSVLDEVGEESTSGTLTLDFLARCFTDLHERYADSYKLCNLSCIACSYAPPLFIREFQGWDPLRNPSHGLELVSTWKTVFDAVNWEQLMLRFIVPKLQLVLQEFEVNPASQKLDQFFWVIKWASVIPIHIMVDMMEKFFFTKWLQVLHHWLCSNPNFEEVMKWYNGWKELIPEELLANESIQFQINRGLDMMSQAVDGMEVVQPGLKENISYLWVREQRQFEAQQKAASYAQQQAAAALGGANADGVHDLSLKEVIEAHAQHHGLLFKIKPGRMHNGHQIYGFGNVSIIIDSLHQKDYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGSIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHASVDHVQKHFDFFEEEARRLLSSGLAIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWLKTRENLGFPLGFISEPDNFVLPKEVLEAACEKVHDQSRAFVLEIGTEEMPPQDVVDASKQLKDLMLQLLEKQRLKHGNMQVFGTPRRLVVAIENLSTKQAEVEVEVRGPPVSKSFDHEGNPTKAIEGFSRRYSVPLDLVYRKVDGKTEYVYARVKELSRYSLEVLSEDLPATISKISFPKTMKWNSQVIFSRPIRWILAMHGDVVVPFMFAGVLSGNLSRGLRNTSSAILQVESAESYSVAMKHAGINVAVEDRKKIVVQQSNALAESVNGQIVIPTGLLDEVVNLVEAPIPVLGKFKETFLALPKELLSMVMQKHQKYFAVCDDEGQLLPYFIAVANGAIDETTVRKGNEAVLRARYEDAKFFYEMDTRKKFSEFRKQLKDILFHEKLGTMLDKMTRIENMVIMLSCILNISEDKQQIIRDAASLAMSDLATAVVTEFTSLSGIMGRHYAIRDGYSEQIADALFEITLPRFSGDMLPKSDAGIVLAIADRLDSLVGLFSAGCQPSSTNDPFGLRRISYGLVQLLVEKNKNLNLKEALQLAADAQSIKVDPHVIDDVYQFVTRRLEQFLVDKGVSAEFVRSVLAERAKFPSLAAKSAYKMEELSRDTLFPKVVEAYSRPTRIVRGKEGELNMTVDEAAFETNEERVLWSTFLSVKEGINPGLDIDDFVEISSQLIQPLEDFFNNVFVMVDDDKIRKNRLAMLKEISELPRGIADLTVLPGF 1558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00615 1558 MobiDBLite consensus disorder prediction 14 56 - -
Adu09g00615 1558 Pfam Glycyl-tRNA synthetase alpha subunit 570 841 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 Pfam G-patch domain 72 112 IPR000467 GO:0003676
Adu09g00615 1558 Pfam Glycyl-tRNA synthetase beta subunit 877 1421 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 Coils Coil 158 178 - -
Adu09g00615 1558 MobiDBLite consensus disorder prediction 124 150 - -
Adu09g00615 1558 Hamap Glycine--tRNA ligase beta subunit [glyS]. 874 1555 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 Gene3D Class II aaRS and biotin synthetases; domain 2 766 845 - -
Adu09g00615 1558 TIGRFAM glyQ: glycine--tRNA ligase, alpha subunit 569 847 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 ProSiteProfiles G-patch domain profile. 71 116 IPR000467 GO:0003676
Adu09g00615 1558 PANTHER GLYCYL-TRNA SYNTHETASE 873 1558 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 TIGRFAM glyS: glycine--tRNA ligase, beta subunit 875 1555 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 Gene3D Bira Bifunctional Protein; Domain 2 554 765 IPR045864 -
Adu09g00615 1558 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 572 837 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 Coils Coil 234 275 - -
Adu09g00615 1558 Pfam GC-rich sequence DNA-binding factor-like protein 347 422 IPR022783 -
Adu09g00615 1558 Pfam GC-rich sequence DNA-binding factor-like protein 294 352 IPR022783 -
Adu09g00615 1558 SUPERFAMILY HD-domain/PDEase-like 1204 1336 - -
Adu09g00615 1558 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 1231 1520 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 SMART G-patch_5 69 114 IPR000467 GO:0003676
Adu09g00615 1558 Hamap Glycine--tRNA ligase alpha subunit [glyQ]. 561 842 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 PRINTS Glycyl-tRNA synthetase alpha subunit signature 802 818 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 PRINTS Glycyl-tRNA synthetase alpha subunit signature 668 692 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 PRINTS Glycyl-tRNA synthetase alpha subunit signature 717 732 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 PRINTS Glycyl-tRNA synthetase alpha subunit signature 694 714 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 PRINTS Glycyl-tRNA synthetase alpha subunit signature 615 630 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 PRINTS Glycyl-tRNA synthetase alpha subunit signature 636 656 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 SUPERFAMILY Class II aaRS and biotin synthetases 570 842 IPR045864 -
Adu09g00615 1558 CDD GlyRS_alpha_core 564 841 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Adu09g00615 1558 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00615 Adu-Chr9 7885024 7910160 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00615 68 112 C2H2 Transcription Factor Family AT5G26610 46.667 7.03e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00615 K14164 - gmx:100787365 1729.92