Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00572 ATGGGTAATCAGAAGCAAAAGTGGACGCAAGATGAAGAAGACGCACTCATCGCTGGCGTGGAAAAACACGGTCCAGGAAAGTGGAAGAACATTCTCAAAGACCCTCAATTCGCACCATTTCTCACTTCACGTTCCAATATCGACCTCAAGGATAAATGGCGGAATTTGAGTGTTAGCAATGGCACTCAAGGGTCCAAGGAAAAATCTAGGGTTCCTAGAATCAAGGCTGCTGCCCCAGTTGCTGCTGCTGCTGCTAGTAATGCTATTGTTGTTGCCGGGGAAGATGCTACTATTGTCACCACTATGATTCATCAACCTGATCCTTCTGTTGCTGTGGGTGATTCTTCTCAAAATGACGAAGATGCCAAGAATCGTCCGAGGTACAATGCAATAGTCAAGGGAAACTTGAAAAGGTTTGTCCTATTTGCTGTGAAAAAGAATGTGTGGCCACAACGGCAACAACCACCACCACCCCCCGAGTTTGTGGCATCTAATGAGACAATAAAGGAAGCTGCTGAAACTGTAGCCTACAGAATTGCCGAGGCCGAAAGCAAGTCATATTTAGCCGCCGAAGCAGTCAAGGAGGCAGAACGAATTGCACGCTTAGCTGAAGATGCTGAGGCGATGTTACAGCTAGTACAACAGATTTATGATGCTTGTTCGCGTGGTGAAGCTGTCATCTTGGCATCTTAA 693 0.4646 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGTQGSKEKSRVPRIKAAAPVAAAAASNAIVVAGEDATIVTTMIHQPDPSVAVGDSSQNDEDAKNRPRYNAIVKGNLKRFVLFAVKKNVWPQRQQPPPPPEFVASNETIKEAAETVAYRIAEAESKSYLAAEAVKEAERIARLAEDAEAMLQLVQQIYDACSRGEAVILAS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00572 230 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 155 229 - -
Adu09g00572 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Adu09g00572 230 SMART sant 4 59 IPR001005 -
Adu09g00572 230 Gene3D - 8 85 - -
Adu09g00572 230 PANTHER SINGLE MYB HISTONE 4 1 132 IPR044597 GO:0003691
Adu09g00572 230 PANTHER SINGLE MYB HISTONE 4 155 229 IPR044597 GO:0003691
Adu09g00572 230 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Adu09g00572 230 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 1 132 - -
Adu09g00572 230 Coils Coil 189 209 - -
Adu09g00572 230 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Adu09g00572 230 CDD SANT_TRF 6 56 - -
Adu09g00572 230 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00572 Adu-Chr9 7304353 7305754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00572 1 229 Single Myb Histone (SMH) Gene Family AT1G72740 34.266 5.32e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu09g00572 Myb_DNA-binding 1.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00572 K09422 - gmx:780537 243.817