Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00567 ATGGGAAGGGCTCCTTGTTGTGAGAAAGTGGGGTTGAAAAAGGGAAGGTGGACAGAAGAAGAGGATGAACTATTAACAAAGTATATTCAAGTCAACGGTGAAGGTTCATGGAGGTCATTGCCCAAAAATGCAGGATTATTAAGGTGTGGAAAGAGTTGCAGATTAAGATGGATTAATTATTTGAAAGCTGGGCTTAAGAGAGGCAACATTTCTGCTGAAGAAGAAGATCTCATTGTCAAGTTGCATACAACTTTTGGCAACAGGTGGTCTTTGATAGCGAGTCATTTGCCGGGAAGAACAGACAATGAAATCAAGAACTATTGGAACTCTCACTTGAGTAGGAAAATCTACAGTTTTCGGAGAGCAACTAACCTAGACACCACCCACATAGGGTCCACCGATACACCCAACAATGTTCCCGTTTATCCAAAGCCTAAACCTGGTAGAACAAGCCGTTGGGCCATGAAGAAGAACAAAACCTACATACACAACAATAAGGGTAACAATAATAATAATAATAATAATAATAATATTCATAACAACCAAAATAACCAAAAAGACGAAATTGCCCTTCGCCAGCTCAGCCCCCGAGAAAAAGAGGATGATGCTGTTCCAACTCCACCAACTCCTTCGCTTGAGAGTGAGGGTTTTTGCAACACTGTTGAGGATCTCATGGTGTTGGATTTGGACCCTAACAACAATAATAATAATGGAGTGGAAAAAGAAGAAGAAGTAGAAGAAAAAGAAAAGGAAAAAGAAAAAGTTCAGTGCCCTACTACGTATGAGAAAGAAAAGAAGGACACGTTGTTAGGACCATATGATGAACAAGTTGAAGATCTTACTAATAATATTAATAATAATGGCGGTGGGGCGTTGAGTCTTGATGACATGTTGGACAATTTCATGTTGGAAGAAATTGTATGTGGGGTTCACAACTTAAATGAAGATATTGAAATTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTGAAGAGTGGAATAATTTAGGGTTAGATGAATATTTGGATTGGGAGAGTGTTATGGAATTCATGAATAATAATAATAATAATAGTGAGTCATCAGAGGGTTGTTATTTGGAGCAGAAAGAAAATTTGCTGACGTGGCTGTGGAAAGATGATGATGATTGGGAAAGTGACTGCATGAAGTTGGGGGAAAACATGGATAGTAGTGAGAAACAAAATGATGATGATGTTGTTGCTTGGTTTCTCTCTTGA 1251 0.3709 MGRAPCCEKVGLKKGRWTEEEDELLTKYIQVNGEGSWRSLPKNAGLLRCGKSCRLRWINYLKAGLKRGNISAEEEDLIVKLHTTFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIYSFRRATNLDTTHIGSTDTPNNVPVYPKPKPGRTSRWAMKKNKTYIHNNKGNNNNNNNNNNIHNNQNNQKDEIALRQLSPREKEDDAVPTPPTPSLESEGFCNTVEDLMVLDLDPNNNNNNGVEKEEEVEEKEKEKEKVQCPTTYEKEKKDTLLGPYDEQVEDLTNNINNNGGGALSLDDMLDNFMLEEIVCGVHNLNEDIEINNNNNNNNNNNNNNNSEEWNNLGLDEYLDWESVMEFMNNNNNNSESSEGCYLEQKENLLTWLWKDDDDWESDCMKLGENMDSSEKQNDDDVVAWFLS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00567 416 Gene3D - 11 67 - -
Adu09g00567 416 MobiDBLite consensus disorder prediction 127 182 - -
Adu09g00567 416 CDD SANT 16 61 IPR001005 -
Adu09g00567 416 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu09g00567 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Adu09g00567 416 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu09g00567 416 MobiDBLite consensus disorder prediction 237 257 - -
Adu09g00567 416 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu09g00567 416 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu09g00567 416 MobiDBLite consensus disorder prediction 228 257 - -
Adu09g00567 416 MobiDBLite consensus disorder prediction 157 182 - -
Adu09g00567 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Adu09g00567 416 CDD SANT 71 112 IPR001005 -
Adu09g00567 416 SMART sant 13 63 IPR001005 -
Adu09g00567 416 SMART sant 66 114 IPR001005 -
Adu09g00567 416 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu09g00567 416 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 357 - -
Adu09g00567 416 PANTHER MYB TRANSCRIPTION FACTOR 2 357 - -
Adu09g00567 416 MobiDBLite consensus disorder prediction 197 216 - -
Adu09g00567 416 Gene3D - 71 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00567 Adu-Chr9 7210241 7216715 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00567 1 162 MYB Transcription Factor Family AT5G49330 65.698 5.56e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu09g00567 Myb_DNA-binding 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00567 K09422 - gmx:100814275 352.443