Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00565 ATGGGGAGAAGAAACGGGGGAAGGCCACTGTTCGGAACTCTCCGTCGTCGATTGGATTCGTGCAAGTCCCGCTACACCACCGTCGATGACATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAGCGCACCAAGCAGCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTGCCAAACCCGCGGCGCCCAAAGTCTCTCCCACGCGCAGGGTTCATGATGACGACGAAGACGATGACGAAGAAGGAGGTCGAAGCGCGCCGCGAAGGAGACGGAATACAATCGACCAAGGCGAAGAAAGGTTGCAGAAGATGGAGGCTTTGCACCTGCGAAAAAGGATGCAGGGAGAAGAGGAAGCTCAGGGTTCTGCATCTACGTCCTCTGCTTCAAGCTCGAGCGCGTCCGGGAGCAGCGGCAGTGAGGAGGAGGAGGATGATGATGATGATGAAGCAGTATCTATGTCGACATCGGAGGACGCAATTTACGGGGAGAAGTACGAACCTGCTTTCGATTTGATGAAGACGATGCTGCGGAATAAGTACACTCCCAAAAAGGATGATAATGTGAGGAAGAAGAAGCCAGTTGTGGAGGATAAGAACGTTGAATTGGAGGTGGCCAATAATAGCAAGGTTACTAACGAGCTTTGTGCTGTGAACGGAGGCAGAGGCAGAGGCGAAGCGAAAGCTGCTGTGAAGGATGTGAATTCAAAGGGTTCCGTTTCGAATGGCACCGGTGGTGGTGGCAGCGATGTTGAATTGAAACAGAAGACGGGACCCAGGTTCAGTGATTTGGGTGGAATGCAGGATGTTTTGGAGGAGCTGATGGAAGTGATCGTGCCATTGTATCGTTCCGAGTTGCCAAGAGAGCTGGGTGTTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCTGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCGGTCTTCCCTTCTATCAGATATCAGCTACTGAATTGGTTTCAGGAGTCTCAGGTGCATCTGAAGAGAATATTAGAGAGCTTTTCACTAAAGCATATAGGACTGCCCCATCAATCGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGATAATTTACAACGAGAGATGGAGAAGAGAATTGTAACACAGTTACTGGTTAGCATGGATCAATCAAGTAGCTGTATGCAATCCGCTAATGATTCGGACAGTTCTAAAGTTCATTCTGGCCATGTTCTTGTAATTGGAGCAACAAATAGGCCTGATGCTCTTGACCCGGCCTTGAGAAGGCCTGGGCGGTTTGATCGTGAGATTGGTTCATTGGATCTTAAACATATAGCAAGATCTACGCCAGGATACGTCAGTGCTGATTTGGTAGCTGTGGTTAAGGAGGCTGGTAATTTGGCAATAAAGAGAATCCTTTCTAGAAGGAAATGGGAACTATCTCAGGGTCTTACAAGGTGTCTTGGAGACTGGTGGAAGGAACCTTGGTCTCATGAAGATGTGGATAAGCTTTTTTGCACAATGTCTGATTTTCAGGAAGCAGTGAAAAAGGTGCAACCTTCATTAAGAAGAGAGGGCTTCTCATCCGTTCCCAATGTGAAATGGGAAGATGTTGGGGGCCTTGATTGTTTAAAGGAGGAGTTTGAATCCAGTATAATAAGGCCGATAAAATATCCCGAGGTTTATCAGACATTTGAGGTGGTAAATGAGACGGGAATTTTGCTTTTTGGGCCCCCTGGTTGCGGTAAAACTCTTATTGCCAAAGCTGTTGCCAACGAGGCAGGAGCTAATTTCATTCATATTAAGGGGCCTGAACTCTTAAATAAATTTGTTGGAGAAAGTGAGCGAGAAGTTCGACGAGTGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATAGTATTTTTTGACGAGGTGGATGCTCTATCAACCAAACGTGATTCGGAAGGTGGATCGGTAGTCGAACGAGTAGTGAACCAGTTACTTATTGAGCTAAATGGTGGTGACCAGCGCCAAGGTGTTTTTGTTATTGGTGCTACAAATAGGCCCGATGTGATGGATGAGGCTCTCCTCCGTTCTGGTAGACTTGGTAAATTTCTTTACGTTCCTGTGCCGAACGCCGACCAGCGATTTTCAATATTGAAAGCTCTTGCAAGGAAGAAGCCTGCTGATTCTACTGTGGATTTGAGAGCCATAGCTGAAGCTTGTGAAAATTTTAGTGGCGCAGACCTTGCTGCATTGATGAATGAAGCAGCTAAAGCTGCTGTCAATGAGAAATTGACCTCAGTTGAAGCTACTAGTGATACTAATACATACATGCCAAGGCATTTTGAGATAGCACTTACTAAAGTCTCTCCCTCCGTGTCTCCCGCGGAAAGGCGAAGGTATGAGCGTTTGGCAGAGCGCTTTAAAAATCATGTTATACTTGGTGGTTTAGTTGACCGTTTCATAGATTGGGCATTGCCCTTGGTAAGCAATGTCAACGCCGTTGATGGGACAAAGGAATTGGCATTGAAAGGTTTGCGTGAGTTTCTTAATGTTGGGGATATTGGTGGAGTTGAGAGATATGCTTTGCCAATTCTCAAAGCTTGTCAGGTGCTGCTTGAGGATGAGAGAACTTCATTGAGCTTGTTGCATAGGCTTGTTGGGTTATCACTTTGA 2670 0.4693 MGRRNGGRPLFGTLRRRLDSCKSRYTTVDDIVNHLRSTYPDYQRTKQQALTRLVQQVLEPRAKPAAPKVSPTRRVHDDDEDDDEEGGRSAPRRRRNTIDQGEERLQKMEALHLRKRMQGEEEAQGSASTSSASSSSASGSSGSEEEEDDDDDEAVSMSTSEDAIYGEKYEPAFDLMKTMLRNKYTPKKDDNVRKKKPVVEDKNVELEVANNSKVTNELCAVNGGRGRGEAKAAVKDVNSKGSVSNGTGGGGSDVELKQKTGPRFSDLGGMQDVLEELMEVIVPLYRSELPRELGVTPTTGILLHGPPGCGKTTLAHAIANETGLPFYQISATELVSGVSGASEENIRELFTKAYRTAPSIVFIDEIDSIASKRDNLQREMEKRIVTQLLVSMDQSSSCMQSANDSDSSKVHSGHVLVIGATNRPDALDPALRRPGRFDREIGSLDLKHIARSTPGYVSADLVAVVKEAGNLAIKRILSRRKWELSQGLTRCLGDWWKEPWSHEDVDKLFCTMSDFQEAVKKVQPSLRREGFSSVPNVKWEDVGGLDCLKEEFESSIIRPIKYPEVYQTFEVVNETGILLFGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKFVGESEREVRRVFSRARACSPCIVFFDEVDALSTKRDSEGGSVVERVVNQLLIELNGGDQRQGVFVIGATNRPDVMDEALLRSGRLGKFLYVPVPNADQRFSILKALARKKPADSTVDLRAIAEACENFSGADLAALMNEAAKAAVNEKLTSVEATSDTNTYMPRHFEIALTKVSPSVSPAERRRYERLAERFKNHVILGGLVDRFIDWALPLVSNVNAVDGTKELALKGLREFLNVGDIGGVERYALPILKACQVLLEDERTSLSLLHRLVGLSL 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00565 889 Gene3D - 708 785 - -
Adu09g00565 889 MobiDBLite consensus disorder prediction 86 103 - -
Adu09g00565 889 MobiDBLite consensus disorder prediction 58 103 - -
Adu09g00565 889 MobiDBLite consensus disorder prediction 234 262 - -
Adu09g00565 889 Gene3D - 535 800 IPR027417 -
Adu09g00565 889 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 83 805 - -
Adu09g00565 889 CDD AAA 300 441 - -
Adu09g00565 889 MobiDBLite consensus disorder prediction 116 165 - -
Adu09g00565 889 SMART AAA_5 297 447 IPR003593 -
Adu09g00565 889 SMART AAA_5 573 709 IPR003593 -
Adu09g00565 889 ProSitePatterns AAA-protein family signature. 677 695 IPR003960 GO:0005524|GO:0016887
Adu09g00565 889 MobiDBLite consensus disorder prediction 122 141 - -
Adu09g00565 889 Gene3D - 438 524 - -
Adu09g00565 889 Pfam ATPase family associated with various cellular activities (AAA) 301 441 IPR003959 GO:0005524|GO:0016887
Adu09g00565 889 Pfam ATPase family associated with various cellular activities (AAA) 577 706 IPR003959 GO:0005524|GO:0016887
Adu09g00565 889 ProSitePatterns AAA-protein family signature. 415 433 IPR003960 GO:0005524|GO:0016887
Adu09g00565 889 PANTHER AAA-FAMILY ATPASE 83 805 - -
Adu09g00565 889 MobiDBLite consensus disorder prediction 142 157 - -
Adu09g00565 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 535 805 IPR027417 -
Adu09g00565 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 263 521 IPR027417 -
Adu09g00565 889 Pfam AAA+ lid domain 444 477 IPR041569 -
Adu09g00565 889 Pfam AAA+ lid domain 730 768 IPR041569 -
Adu09g00565 889 CDD AAA 576 706 - -
Adu09g00565 889 Pfam Nucleolin binding domain 19 59 IPR031996 -
Adu09g00565 889 Gene3D - 252 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00565 Adu-Chr9 7158151 7164882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00565 514 810 Calmodulin-binding Proteins AT3G56690 44.147 6.35e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00565 K14571 - gmx:100809594 924.465