Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00543 ATGGAGATCGACGAAGCAAAGTTCCTCTGCAGCTACGGCGGCGAGATCAATCCCCGCGGCCGCAACAACAAGCTCGCCTACGTCGGTGGCACCAATAAGCTTCTTTATGTTGACCGTAGAATTGACTTCACAGCCATGGTTGCCAAAATCTCCAGCCTCTTTGACGGCGCCTGCAACGACCATTACTTCTTCAAATACCAAGTCCCCGGCAGCGATGACCTCAATGCTCTCGTCTCCGTCACCAACGACAGAGACCTCCACAACATGATGCTCGTGTTCGATCAACTCTACCGCGACTCCCCTAGATTCCCCCGCATGAGACTCTTCCTCTTCCCAAACCCTAACAAACCTCTCGATTCGGTTAAGCCAGACTCTAATGGGCTATCTTCGAATCTTtggaagcatgatgtGGACGACTTTGAACTTGTGGATAAGATTGTCAAAGATGTTTTGCGAAAGCTGAATAATCCTTGTCTGCCTAAGGATATCAAGGGTGTAGTTGGTATTAATAAAAATCTTGAAAAGTTAGAATTGTTATTAAGTTCGGTTCCTGATGAACAAACGGGAATAATTGGGATTTGTGGGATGGCAGGAGTAGGCAAGACGACTGTAGTGAAGAAATTATTTGAGAAACATTCTTATCGGTATGAAGGTTCCTGTTTCTTAGAAGGTGTTCTGGAAAGATTGGAAAAGTATGGGCAGGAGATAGATGAGTTGTGTAATCAACTTCACTCCAAGTTGTTAGAAGGAAAAGACTTCCCAAATAGCATGGCAGATACAAATTCTGCAAAGTGCTGTCTCTGCAGCAGACAAAGAAGTTTCATAgttcttgatgatGATTTGAACAAGAAGTGGGGAGGGGAATCATTTGTCAAAAATCTATCAAGAATCCTGAAAATCATAGCAAGGATATGCCAATTTCGCATATCATCAGAGCCACGCCTTGTCAAAAAATGA 957 0.4295 MEIDEAKFLCSYGGEINPRGRNNKLAYVGGTNKLLYVDRRIDFTAMVAKISSLFDGACNDHYFFKYQVPGSDDLNALVSVTNDRDLHNMMLVFDQLYRDSPRFPRMRLFLFPNPNKPLDSVKPDSNGLSSNLWKHDVDDFELVDKIVKDVLRKLNNPCLPKDIKGVVGINKNLEKLELLLSSVPDEQTGIIGICGMAGVGKTTVVKKLFEKHSYRYEGSCFLEGVLERLEKYGQEIDELCNQLHSKLLEGKDFPNSMADTNSAKCCLCSRQRSFIVLDDDLNKKWGGESFVKNLSRILKIIARICQFRISSEPRLVKK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00543 318 Pfam PB1 domain 23 112 IPR000270 GO:0005515
Adu09g00543 318 SMART PB1_new 20 111 IPR000270 GO:0005515
Adu09g00543 318 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 5 122 - -
Adu09g00543 318 Coils Coil 222 242 - -
Adu09g00543 318 Gene3D - 24 112 - -
Adu09g00543 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 279 IPR027417 -
Adu09g00543 318 PANTHER OS05G0427100 PROTEIN-RELATED 5 122 - -
Adu09g00543 318 SUPERFAMILY CAD & PB1 domains 23 120 - -
Adu09g00543 318 CDD PB1_UP2 9 111 - -
Adu09g00543 318 Gene3D - 141 303 IPR027417 -
Adu09g00543 318 PRINTS Disease resistance protein signature 190 205 - -
Adu09g00543 318 PRINTS Disease resistance protein signature 267 281 - -
Adu09g00543 318 Pfam NB-ARC domain 171 283 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00543 Adu-Chr9 6832848 6835396 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00543 2 116 MAP Kinase Kinase Kinase AT5G57610 43.478 4.93e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00543 - - adu:107465381 275.018