Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00542 ATGCGAAACACCGGCCAATTAACACAAGAAGAAGAGTACCCTGTACAGAAGGTGTTTGTGAAATTGACGAGATTGCGACACGGAAGGAGAGAAAGTATGAAAGTGTATGCCTATTGTGGTTCAAATGCTATATGCATTGTGGATAGTAATGTTGCAATATGCAAGTGTCTGAAAGGGTATATTCCCAATCCCAGTTTTCCTAAACCACAAAATATGTCATATTGGTCCAATGGTTGTGAGAGAAAGGTTGCACTGGGTTGCAATAACACCAATGGCTTCTTGAGGTACACAGGCATAAAATTGCCAGACACATCTTCTTCATGGTATAGTGAGACAATGAACCTCCAGGAATGTCAAAAGTTTTGCCTGAAAAACTCTTCTTGTTCAGCATATTCAAGTTTGGATATTCGTAATGGAGGAAGTGGTTGTCAAGACCTTTACCTAAAAGTCCCTTCTTCAGAATTGGCTGCTAATGGCCATGGAAACATCAAGCAAAAGAAGGTAGGAATTGCAGTTGGTGTGATTATTTTCGGATTAATCACATGTGTCAGCATAATGATTATACATCCAGGGACAAGAAAAATAATTTACAGAGAAAAACAGATGCAAGAAGATATTGATCTACCAGCATTCAATTTCTCAGTCTTAGCTAAAGCTACCGAAAAATTTTCAAGCAGTAACAAACTTGGAGAAGGTGGTTTTGGAGAAGTATACAAGGGTACATTGACTGATGGGCAAGAGTTAGCCATAAAAAGACTTTCAAAAAAGTCTGGCCAAGGGTTGGAAGAGTTCAAAACTGAAGTGGCGTTAATAGCCAAACTTCAGCATCGTAATCTTGTGAAGCTTCTTGGTTTTTGCATTCAAGGAGTAGAAAAAATATTGGTCTATAAATACATGCCAAACAAAAGCCTGGACTACTTCATTTCTGGTTGGACCCTTTTCTACTGTATATTCTAA 957 0.3845 MRNTGQLTQEEEYPVQKVFVKLTRLRHGRRESMKVYAYCGSNAICIVDSNVAICKCLKGYIPNPSFPKPQNMSYWSNGCERKVALGCNNTNGFLRYTGIKLPDTSSSWYSETMNLQECQKFCLKNSSCSAYSSLDIRNGGSGCQDLYLKVPSSELAANGHGNIKQKKVGIAVGVIIFGLITCVSIMIIHPGTRKIIYREKQMQEDIDLPAFNFSVLAKATEKFSSSNKLGEGGFGEVYKGTLTDGQELAIKRLSKKSGQGLEEFKTEVALIAKLQHRNLVKLLGFCIQGVEKILVYKYMPNKSLDYFISGWTLFYCIF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00542 318 ProSiteProfiles Protein kinase domain profile. 223 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu09g00542 318 Pfam PAN-like domain 87 143 IPR003609 -
Adu09g00542 318 Pfam Protein tyrosine and serine/threonine kinase 226 308 IPR001245 GO:0004672|GO:0006468
Adu09g00542 318 SUPERFAMILY Protein kinase-like (PK-like) 201 312 IPR011009 -
Adu09g00542 318 CDD PAN_AP_plant 83 151 - -
Adu09g00542 318 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 29 309 - -
Adu09g00542 318 ProSiteProfiles PAN/Apple domain profile. 87 168 IPR003609 -
Adu09g00542 318 ProSitePatterns Protein kinases ATP-binding region signature. 229 251 IPR017441 GO:0005524
Adu09g00542 318 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 29 309 - -
Adu09g00542 318 Gene3D Hepatocyte Growth Factor 84 155 - -
Adu09g00542 318 Gene3D Phosphorylase Kinase; domain 1 190 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00542 Adu-Chr9 6825216 6828266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00542 110 308 Receptor kinase-like Gene Family AT4G23320 44.340 1.06e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu09g00542 PK_Tyr_Ser-Thr 5.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00542 - - ahf:112710855 568.155