Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00541 ATGGAGAACTACGACGCGAAGTTTCTATGCACCTACGGAGGCGAGATCAAACGCCGCCCTAACGATACCAAGATCTCCTACGTCGGTGGCCTCAACAAGATCCTCTACGTTAACCGTGGAATCGACTTCATCGCCATGCTCGCCGAACTTTCCGCCCTCTTTGACGTCGCCGGCAACATCTGCTTCAAGTACCTACTCCCCAACGATGAACTCGATGCCCTCATCTCCGTCACCGGTGACAACGACCTGAACAACATGATGCTCGAGTATGATAATCTCTACAGAGATTCCCCTAAAATCGCTCGCATAAGGCTCTTCGTCTTCCCTGGCAACCATTTCAATTTGGATCGCAATCCCGCTTCCACCGAAACCCTAAAAACCAAGAAGACAGTCAAACAAAACTCCAAAGTCAACGGCGACAGTTTAGTTGTTGTTCTTCCGCCTCCGCCAGTTGATGTTAAAACAGAGCGGATTGATTGTTCTGATCCGACCCGATTTAATAGCCTGTTATCTGCTGCAAACTCCTGCAGGGATGAGTCTGAGCTCATTCAAAAGATTGTGAAAGACGTTTTGCAGAAGCTGATTGATCACAACCCACCGAATGATATTAAAAGTTTTGTAGGTATTGACGGAAATCTTAAAGCTATAGATTCGTCGCTAAGAGAAGTCCTTGAAGTCCAAACAAGAATGATTGGAATTTGGGGCATGGGTGGGATAGGAAAGACCACTCTAGCAAAATTTGTATTCGAGAAATACTCTTATCAGTATGAAGGTTCCTGCTTCTTGGAAGATGTTAGAGAAAGATCAGAAAAATATGGACATTCGCTATATGAATTACGCAATGAACTTTACTCAGAGTTGTTGCAGGAAAATAATTGCAAAGACAGCACAAGAAAATCCACCAATGCTAAGGAAAGGCTCCGCAGTCGAAGAATTTTCATAgttcttgatgatgtgagttgttcaaagcaattaaaataccttgctggggagcatctatggtttggtgcaggtagtaagatcattgtcacagctacagacaagagtgtatttgctcaatgggaagatgaagaaatatatgagatgaaggtgttaaattctgaggactcccttacattgtttagcttgaatgcattcaatcaagaccatccgaaaatgggatatgaaaatctatcatgggaagcagttaaatattgtgaaggtttaccattagctttgaaagtgttgggttcttttcttcgttccaagagtgaaattgaatgggatagtgcattgcaaaacatcaaaaagattcctgacgcaccaattcaaaatgtattaaggttgacctatgatggattaaattatgaggagagagaaatttttctagacattgcatgtttttttaagggattccttaaagaacatgtagttaatctgttagaaaattgtggcttcgatgcagCTAATGGCATGAGGTCCCTTCATGATAAGTCTCTAATAGCTATATCTGATAATTCTCTGAGGATGCATGACTTGATCCATGAAATGGCTTTGGAAATTGTTCGCAAAGAATCTATCAAAAATCCTGAATATCGTAGCCGTTTGTGGGACTATAATGATATTAGGGATGTTTTGGGAAACAACAAGGGAACCGATGCAATTGAAAGCATAATGTTAGATATGTCTCATATAGATGATCTACAGTTGAGTGCTGACACATTCAAAAAGATGTCTAGATTAAGATTGCTCAAATTGTATGACTCGTCAGAGAAGCATGGTAAATTAAGTAATCTGCAGCTTCCTATAGGGTTGAAGCCATTAAGGTACTTTGAATGGCATGCGTACCCTTTGCCGACTCTGCCATCAAACTTTTGTCCCGAGAAGCTTGTTACCCTCCGTATTCAGAACAGTCAACTTGCAAGACTATGGGATGGAAAGCAGAATCTTGTGGATTTAGAGGAAGTAGATCTAACTGGGTGCCAAAAGTTGGTAGAACTCCCAGATCTCTCTAAAGCAAAAAATCTTAAAAGTGTACATCTGTCCAACTGTAGAAGTTTGGCCCATGTCCATCCATCTATTTTATCACTTGGCAAGCTTGAGCTTTTGGATCTATTGAATTGCATTAAGCTTGAAATGCTTGGAAACAAGAAGCATTCAAGATCTCTTAAGCACCTGTGCGTTGCTTATCATCGTTACAAAAGTTACAGTTGGATGGAAGCCATGTGGAGACTTTGCCTGGGAGCATCAAGCATCTTCCAAATCTGA 2247 0.3289 MENYDAKFLCTYGGEIKRRPNDTKISYVGGLNKILYVNRGIDFIAMLAELSALFDVAGNICFKYLLPNDELDALISVTGDNDLNNMMLEYDNLYRDSPKIARIRLFVFPGNHFNLDRNPASTETLKTKKTVKQNSKVNGDSLVVVLPPPPVDVKTERIDCSDPTRFNSLLSAANSCRDESELIQKIVKDVLQKLIDHNPPNDIKSFVGIDGNLKAIDSSLREVLEVQTRMIGIWGMGGIGKTTLAKFVFEKYSYQYEGSCFLEDVRERSEKYGHSLYELRNELYSELLQENNCKDSTRKSTNAKERLRSRRIFIVLDDVSCSKQLKYLAGEHLWFGAGSKIIVTATDKSVFAQWEDEEIYEMKVLNSEDSLTLFSLNAFNQDHPKMGYENLSWEAVKYCEGLPLALKVLGSFLRSKSEIEWDSALQNIKKIPDAPIQNVLRLTYDGLNYEEREIFLDIACFFKGFLKEHVVNLLENCGFDAANGMRSLHDKSLIAISDNSLRMHDLIHEMALEIVRKESIKNPEYRSRLWDYNDIRDVLGNNKGTDAIESIMLDMSHIDDLQLSADTFKKMSRLRLLKLYDSSEKHGKLSNLQLPIGLKPLRYFEWHAYPLPTLPSNFCPEKLVTLRIQNSQLARLWDGKQNLVDLEEVDLTGCQKLVELPDLSKAKNLKSVHLSNCRSLAHVHPSILSLGKLELLDLLNCIKLEMLGNKKHSRSLKHLCVAYHRYKSYSWMEAMWRLCLGASSIFQI 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00541 748 CDD PB1_UP2 9 108 - -
Adu09g00541 748 SUPERFAMILY L domain-like 502 730 - -
Adu09g00541 748 Gene3D - 184 359 IPR027417 -
Adu09g00541 748 Pfam NB-ARC domain 213 430 IPR002182 GO:0043531
Adu09g00541 748 Pfam PB1 domain 21 109 IPR000270 GO:0005515
Adu09g00541 748 Gene3D Ribonuclease Inhibitor 531 729 IPR032675 -
Adu09g00541 748 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 167 720 IPR044974 GO:0006952
Adu09g00541 748 SUPERFAMILY CAD & PB1 domains 22 114 - -
Adu09g00541 748 PRINTS Disease resistance protein signature 306 320 - -
Adu09g00541 748 PRINTS Disease resistance protein signature 399 413 - -
Adu09g00541 748 PRINTS Disease resistance protein signature 641 657 - -
Adu09g00541 748 PRINTS Disease resistance protein signature 230 245 - -
Adu09g00541 748 Gene3D - 364 448 IPR042197 -
Adu09g00541 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 458 IPR027417 -
Adu09g00541 748 SMART PB1_new 20 108 IPR000270 GO:0005515
Adu09g00541 748 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 167 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00541 Adu-Chr9 6821439 6824513 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00541 177 705 WRKY Transcription Factor Family AT4G12020 38.095 1.70e-84 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00541 - - adu:107472645 1037.71