Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00539 ATGGAGAATTACGACGTGAAGTTTCTCTGCAGCTATGGCGGCGAGATCCACCACCGCCCCAACAAGAAGATCTCCTACGTCGGCGGCCACAACAAGCTCCACTACGTTAACCGTGGAATCGACTTGACCGCCATGCTCGCCGAACTCTCCGCCCTCTTTGACGCCGCCGGTGACATCCACTTCAAGTATCAGCTCCTCGGCGATGACTTCGACGCCCTAATATCCGTCACCAGCGACAGCGACCTAAACAGCCTGATGCTTGAGTATGATAACCTCTACAGAGATTCCGCTAAAACCGCTCGGATGAGATTATTCATCTTCCCTGGTAACGGTCCTGATTCCGCGTCCACCCAACCCTTCCCAGCTAAACTGAAATCCAAAGTCAACGGCGGTGCTGTTGTTCCTCCGCAAATTACGCCGGTGAAGTTCCAAGATCTGCCACCGGTTAACAATTTTAATACCTCAGACCGGGTGTTGGTTTCGGATCCAAAAGTGAATCGACCGGTCGAAGATTCCGGTTCTTCCCGTTTGAATAGTCCGTTACCTGCTTTACAGtatgataaaaacaagaaggctgaggttcagaagtggagggaagctctCACTGCAGCAGCAAATTTAGAAGGCTTGGACTCCCGTTCTTATAGGGACGAAATTGAATTCATTCAGAATATTGTCAAAGATGTTTTGCAGAAGCTGATTGACCACAACCCACCCAATGATAGTAAAAGTCTCGTTGGCATTGGTGAAAATCTTGAAAATGTAAAATCACTATTAAGTGAATCTGTTGAAGTCAGAATGATTGGAATTTGTGGCATGGGGGGTATAGGAAAAACAACTCTAGCAAGACTTATATTTGAGAAATATTCTTATAAGTTTGAAGGCTCCTGCTTCTTAGAAAATGTACGGAAAAGATCAGGAAAGTCCGGGTTAACTGAGTTAGTTCGTCGACTTTACTTGGAGCTCTTACAGGGAAAATTTTGGCAAAATAACACAGGAAAATCCACTTTTGTTGAGGACAGGTTAAGCAAACAAAGAAATTTCATAgtccttgatgatgtgagtagtttagagcaattaaattacctggttcggaagcttcaatgctgtggcgcaggtagtaagatcattatcacagctagagacaaaaatgtgctggttccaacggttgaaacaatatatgagatgaagatattagattctcatgagtcatttaaactgtttagtttgaatgcattcaatgaagactgtccacaaataggatacgaggagctatcatggaaagcggttggctgttgcaaaggcatcccactagccttaatagtattgggttcttttctccattcaaagagtaaaactgattggcatagtgcattgcaaaagcttgagaagacaccagatccagaaattcagaatattttaagattgagttatgatggattagatgatgaggctaaacaaatttttctagacatcgcatgtttttttaagggaGAGCTTGTAGAATACGTAGTTAATCTGTTAGACAGTTGTGGCTTCTATGCAGCTATTGGCATGAGATCCCTTCTTGATAGAGCTTTAATAGCTATATCTCATAATTGTGTGCGGATGCATGACTTGATCCAAGAATTAGGTTGGGATATTGTTTGTCAACAATCTAGTGGAAATGCTGAAAATCGTAGCCACTTGTGGGATTCTAATGATATTTGGGATGTTTTGGGAAACAACAAAGGAACTGATTCTATTGAAAGCATAGTATTGGATATGTCTCAAATAGAAGATCTACAGTTGAATGCTGATACATTCAAAAAGATGCCTAAGTTAAGATTTCTCAAATTATATATCCCATCGGAAAATGATGGCAGATTAAATAAACTGCATCTTCCCGTAGGACTAAAGCCATTTCCTTCTAAATTAAGATACTTGGAGTGGGATGCCTACCCTTTGCCATCTCTGCCATCGAATTTTTGTCCTGAGAAGCTTGTTACTCTTCGCATCCGGAACAGTAAACTTAAAAGACTTTGGGATGGGGTTCAGAATCTTGTTAATTTAGAGGAAGTAGATCTAACAGATTCCCGAAAGTTGGTGGAGCTTCCGGATTTCTCCAAGGCAGATAATCTCAAAAGTGTACATCTGTCTGGCTGTCGAAGTTTGCGTCATGTCCATCCATCTCTTTTATCACTTGGAAAACTTGAACTTTTAGATCTTCTGAACTGTGCAAAACTTGAGATGCTTGAAACTAAGATGCATTCAAAATCTCTTAAGCACCTCTCTATCAAGAGCCGCACAAGTTTAATCCCACCCTATGTCAGTCACTTATCATCTTTACGGAAATTACTTCTAGATGGAAGCCCTGTGGAGACATTGCCGGTGAGCATCAAGCACCTTACGGGGCTGAAAACACTGTCACTAAAAGGGTGTAAGATGCTTCAACATTTGCCAGAGCTTCCATCATCCATTCGTCATTTGACTGCTCTGGACTGCATAATGCTGCAAACTGTGACATTCAGTTCAAATATTCCTAGACTACAAGAAGAAAAACGCATAAACATCTCGTTCCATAATTGCATGAAGTTGGATGTGGCGAATTGTATTTATTGGTACCTTAAAAATATAAGGAAACTTGCTTACGTGTGTGAATCCAGAAGAGGAGGAAAAGGAGTAGTTCGGAGAAGTGATTTCTTCAAGATTTGTTATCCCGACTACAGAGTACCAGAGTGGTTCATGCATCGGACAAAGGGTACTTCCATAACTTTTGAAGTTTCTTCACCTTCCAGTTATGGTTTTAGTTCCCTTCTCTGCGTTGTTCTCCCTAAGTATAGTTTGGATTATGAACTTGATATTAAATGCCGTTGCTACTTGGAAGATGGTAGTAACATGCACAAATATTCATTTGGCATATTATTTCTAAATCACATTCCGGCAGAAGGGTGTTCTGATCATGTTTATATGGCATATAATTATGGAGGCATCTTTGATGTAATCAAGCTGGACAGATTGAATAATAAGATTGCGTCTTCCGGGCAAAACCCGAAAGTCACATTTGAATTCTTTGTCAGCAGTGGCGATACTGGAACAAGGCATTGGGATACTGGATTTTATAGCACATGGAACCATGAGGTTGGAGTTGAAAGCTCCCGGGCCCCAGCTAAAACTCGTATTTGCTCTTGGCTTTATCTAGAAGTGCACGCCACCGCACAATGGTGGTGGTGGCGGTGGCAATGTTATACGGTACAGATCTGTGCATACAAATCAAAGGATATGTTGACAGTGGGAAGCCGTTGGTTGCTGGAAACAGGTTTGGCAGAGCTCTGCAAGCTTGTCTGCCTTGTTGGTTGGAGGGGGGAGCCGGCTAATGGAAACAGTGAATAA 3372 0.3621 MENYDVKFLCSYGGEIHHRPNKKISYVGGHNKLHYVNRGIDLTAMLAELSALFDAAGDIHFKYQLLGDDFDALISVTSDSDLNSLMLEYDNLYRDSAKTARMRLFIFPGNGPDSASTQPFPAKLKSKVNGGAVVPPQITPVKFQDLPPVNNFNTSDRVLVSDPKVNRPVEDSGSSRLNSPLPALQYDKNKKAEVQKWREALTAAANLEGLDSRSYRDEIEFIQNIVKDVLQKLIDHNPPNDSKSLVGIGENLENVKSLLSESVEVRMIGICGMGGIGKTTLARLIFEKYSYKFEGSCFLENVRKRSGKSGLTELVRRLYLELLQGKFWQNNTGKSTFVEDRLSKQRNFIVLDDVSSLEQLNYLVRKLQCCGAGSKIIITARDKNVLVPTVETIYEMKILDSHESFKLFSLNAFNEDCPQIGYEELSWKAVGCCKGIPLALIVLGSFLHSKSKTDWHSALQKLEKTPDPEIQNILRLSYDGLDDEAKQIFLDIACFFKGELVEYVVNLLDSCGFYAAIGMRSLLDRALIAISHNCVRMHDLIQELGWDIVCQQSSGNAENRSHLWDSNDIWDVLGNNKGTDSIESIVLDMSQIEDLQLNADTFKKMPKLRFLKLYIPSENDGRLNKLHLPVGLKPFPSKLRYLEWDAYPLPSLPSNFCPEKLVTLRIRNSKLKRLWDGVQNLVNLEEVDLTDSRKLVELPDFSKADNLKSVHLSGCRSLRHVHPSLLSLGKLELLDLLNCAKLEMLETKMHSKSLKHLSIKSRTSLIPPYVSHLSSLRKLLLDGSPVETLPVSIKHLTGLKTLSLKGCKMLQHLPELPSSIRHLTALDCIMLQTVTFSSNIPRLQEEKRINISFHNCMKLDVANCIYWYLKNIRKLAYVCESRRGGKGVVRRSDFFKICYPDYRVPEWFMHRTKGTSITFEVSSPSSYGFSSLLCVVLPKYSLDYELDIKCRCYLEDGSNMHKYSFGILFLNHIPAEGCSDHVYMAYNYGGIFDVIKLDRLNNKIASSGQNPKVTFEFFVSSGDTGTRHWDTGFYSTWNHEVGVESSRAPAKTRICSWLYLEVHATAQWWWWRWQCYTVQICAYKSKDMLTVGSRWLLETGLAELCKLVCLVGWRGEPANGNSE 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00539 1123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 229 492 IPR027417 -
Adu09g00539 1123 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 205 812 - -
Adu09g00539 1123 PRINTS Disease resistance protein signature 433 447 - -
Adu09g00539 1123 PRINTS Disease resistance protein signature 726 742 - -
Adu09g00539 1123 PRINTS Disease resistance protein signature 341 355 - -
Adu09g00539 1123 PRINTS Disease resistance protein signature 267 282 - -
Adu09g00539 1123 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 205 812 IPR044974 GO:0006952
Adu09g00539 1123 SUPERFAMILY L domain-like 536 866 - -
Adu09g00539 1123 SUPERFAMILY CAD & PB1 domains 23 116 - -
Adu09g00539 1123 Pfam PB1 domain 22 108 IPR000270 GO:0005515
Adu09g00539 1123 CDD PB1_UP2 9 107 - -
Adu09g00539 1123 Gene3D Ribonuclease Inhibitor 750 878 IPR032675 -
Adu09g00539 1123 Gene3D Ribonuclease Inhibitor 566 749 IPR032675 -
Adu09g00539 1123 Gene3D - 398 482 IPR042197 -
Adu09g00539 1123 SMART PB1_new 19 109 IPR000270 GO:0005515
Adu09g00539 1123 Pfam NB-ARC domain 251 473 IPR002182 GO:0043531
Adu09g00539 1123 Gene3D - 230 392 IPR027417 -
Adu09g00539 1123 Gene3D - 171 229 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00539 Adu-Chr9 6811490 6816585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00539 193 831 WRKY Transcription Factor Family AT4G12020 34.245 2.89e-88 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00539 - - adu:107464414 1652.49