Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00532 GTAAAAAAATGGAACGACCCACAATCACTACAActcttttgcttaaaagccttcaatgagattcaccctcgagagggttatgaggttctatctgctagcatggtagagtatgctggcggcgttccattagctttgagggttttgggttcgagtcttcgatcgaaacgagttgacttttggaaaggtactctcgagaaactgaagaggtatcctgataaggctattcaagacttctacaaaatgagctatgatggattagatgaagaagagaaaaagatatttcttgaaattgcattttttcacaaaggagaagaaaaggatagtgtcacaagcatactcatggcctgtgggcttgaagcAAGGTGTGGAATGGTGGTCCTTCGAGATAAAGCTTTCATATCTATTTCATATAATAATACAATAGAAATCCATGACTTGTTGCAAGAAATTGCGTTTGAAATAGTGCGTCGAGAAAGTAGTGAAGATCCTACAAGACGTAGCCGATTGATGAGGGACACTGAAGAAATTTGTACTATCCTCAAAGATAACAAGGGTACAGATGCAATTGAAGGCATAATGTTAGATTTGTCACAAATTGCAGAAATGCAGTTGCGTGCTGATGCTTTTAGAAGGATGAATAATTTAAGATTTCTTAAATTATATAAGCCCTCAGATCAATGTGCTGGTAAAATTAGTCTTCCTGAAGACCTTGACTCACTTTCTGACAAACTAGTTTACCTTGAGTGGTATGGATACCCTTTGGACTCTCTTCCACTAAACTTTTGTGCTAAGTTCCTTGTTGAGATTCGTATGTCGCACAGCAATGTCAAACAACTATGGCAGGGGATTCAGGAAGTTAGCAACCTGGAGAGAATTGACTTAAGTGAATGCAAGCAGTTAATAAAGCTTCCAGATTTGTCTAAGGCAAAAAGACTGAGATGGGTGAACCTCTCCGGCTGTGAGAGTTTATGTGCTCTTCATTCATCAGTTTTATCCTCCGACACACTTATAACTTTGATATTAGACAGGTGCATAAATTTACAATATGTTAAGGGCGATAAGCACTTAAAATCTCTAGAGAATATTAGCGTCAATGGTTGCTCAAGTCTGGAGGAATTCGCAGTGTCATCTGATTTGATTGAAAGCTTGGATCTAAGCAACACAAGAATTGAAATGCTAGACACATCAATTGGCCGTCTATGCAAACTTGGAAGCCTCAATCTAGAAGGTTCTCCCGTTAAGCATCTCCCGACCGAGCTATGCTTGACATCGCTTAAGGTCCTAAAGCTCTCGTATGATGGCCTAGTAATCGACAAGCAACAACTTCATGTTCTCTTTGATGGCTTACGTTCTCTACAGATATTGCATCTCAAGGAATGTAGTAATCTCACTGAATTCCCTGACAACATTGGCATCTTGTCAAAATTACAGGAACTAATACTTGATGGAAGCTCTGTGCAGTGCTTGCCTCCGAGCATTAAGCATCTTCAAAGGCTGGAAATTCTGTCCTTGAAGAGTTGCAAGAAGCTCCGGAGTTTGCCAGAGCTTCCACCACTAATCCACGAGTTCTGTGCTGATGACTGCGCCATATTGAAGTCGGTGTCAAACTTGAAGACCTTTTCTAAGAAGATGGTGGGAAAGACGAAACACATTTCGTTCAAGAATAGCTTGAAATTGGAGGAAGAGTCATTGCAGTCTGTTATGAAAAGCCTCCATTTAACAATGATTAAAGCTGTGGCTAACAATGTGGTAGTGAGAAAACACCGCGGAGGCTATAATTATAACAGTATGGAGGTTTGTTTACCAGGAAGCAGAGTTCCAGGAGAGTTCTTGGCATACAAAAAATCAGAGTCTTCATCCATTATCATTACCGAACTTCCTGACTCTGAATGGTTAGGCTTCATTTACTGTGTTGTTCTTTCGCCATCCGAAGGAATAAGGAAGGAAGGCGCTAAGCTTCGATGTCAATGCCAGTTGGTAGGAGGCCAAAAGGGTACATGGTTGAACAAAGCCGTCAGTGAATTGAACTCGGATCATGTTTATGTATGGTATGATCCACTTCATTGCGACAACATTCTTAGATTCCATCCACCAAAGGTTCGCTTTGAGTTTAGTGTTACAACTGATGAAGGGGAAGTGGATGGATCAATCCATATTAAAGAGTGCGGTGTACTCCTCATAAGTTTTTCCCTTGTGGAAAGTGTTTTACAAGAATTGGAGCTGCATTTGCCTGTTGATTTGGTTGAGGAAGAAAATGTGCTGGCCCCTGAGGAGAAGCCAATTGCATGTTATTCTTCTCAACTAGATACGCCTTCAGAAGATAATCAAAATAAATCCATGGATCTTGACAAATCTAAAGGATTACTGCAAGAAAGAAAAAATGCGCTCGTGCAACGAACTGAATGCACCTTACCTTCAAACATGAAAGATGTAGCCAAACAGGCAGAAGGTGAAGGCGACTCTGCAATGGCTGCTCAGTTGTTAGAAAACTTGGAAGGACCGTTATTGGACGATCATGTCCTAACTTTAGACGATCATTCCCTAATGAAAGGCCATGGAGGTCCTGCACTTTTCCGTTGGCTTCAAGATCAAGCGCTTCGTTCGGCGAGCGTTGCAAGATACGCGGAGCAGGTGTTCCAAGCTGCCTCAAGAAGCATCGCTGAGAAAGATGAAGAATTAAGACTTGCGAGAGATGAGGCGGTCAGGAAGCAAGAAAGTTTGAAAATAATGGAGGATAGACTCCAGGATCTAAACTACCAGCTGGCTTCTTGGAGAAGAAAATATGAAGAAGCTCAAGAGAAATGGCGTATAAGGGAAAGTGCGTTGGAGACAGAGGTGGCAATGTTGGTTGCCTCGTTTCAAAATAGTAGGTTGCAGGTTCAAATTCCGTATCCTGACATTAGGAGGAAGGAGCAGATGTTCAGCGATAAGACCAGCTCTGTTTGGGCAGTTAATCAGCATGGCCGCTTCTTTCCAGCTGCTTCTTGGGCACGACCTGAGACGGGCTTCTTCAAAGTGAACTGCGACGGCAGTGTTTTTGAAGATGAGCATAAGGCGGGCTTTGGGTGCGTGCTCAGAGATAGCTCTGGAAGGTGGGTCCGAGGCTGCTGTGGCAAGGTGGCTGTAACTAGTGGGTTGAGATTGGAGCTTTGGAGCTTATGGAGAGGTCTTCTCCTGGCTTTGGAAGCTGGCATCGAGTTCCTTGTGTGTGAAACGGACTCCATGGAAGCCTTCTCTCTGGTTTCAGGTTGGAGGATTCCCAGTGACCATGTGGAGAAGGATCTGGTTATGCGCTTCATTGAGTTGAAGAGACTGCAGGGCTGGACTGTGCGTTTTGGGCTGATAAGGAGAGATGCCAATTCGGTGGCTGATTGGCTTGCTAAGGAAGGGGCTCACGGCGAGGCTGCCTCTACTGTGTGGTTGCACCCACCAGGCCCGCTTCAGCTGCTCCTGCAAAAGGACCTTGCTTAG 3471 0.397 VKKWNDPQSLQLFCLKAFNEIHPREGYEVLSASMVEYAGGVPLALRVLGSSLRSKRVDFWKGTLEKLKRYPDKAIQDFYKMSYDGLDEEEKKIFLEIAFFHKGEEKDSVTSILMACGLEARCGMVVLRDKAFISISYNNTIEIHDLLQEIAFEIVRRESSEDPTRRSRLMRDTEEICTILKDNKGTDAIEGIMLDLSQIAEMQLRADAFRRMNNLRFLKLYKPSDQCAGKISLPEDLDSLSDKLVYLEWYGYPLDSLPLNFCAKFLVEIRMSHSNVKQLWQGIQEVSNLERIDLSECKQLIKLPDLSKAKRLRWVNLSGCESLCALHSSVLSSDTLITLILDRCINLQYVKGDKHLKSLENISVNGCSSLEEFAVSSDLIESLDLSNTRIEMLDTSIGRLCKLGSLNLEGSPVKHLPTELCLTSLKVLKLSYDGLVIDKQQLHVLFDGLRSLQILHLKECSNLTEFPDNIGILSKLQELILDGSSVQCLPPSIKHLQRLEILSLKSCKKLRSLPELPPLIHEFCADDCAILKSVSNLKTFSKKMVGKTKHISFKNSLKLEEESLQSVMKSLHLTMIKAVANNVVVRKHRGGYNYNSMEVCLPGSRVPGEFLAYKKSESSSIIITELPDSEWLGFIYCVVLSPSEGIRKEGAKLRCQCQLVGGQKGTWLNKAVSELNSDHVYVWYDPLHCDNILRFHPPKVRFEFSVTTDEGEVDGSIHIKECGVLLISFSLVESVLQELELHLPVDLVEEENVLAPEEKPIACYSSQLDTPSEDNQNKSMDLDKSKGLLQERKNALVQRTECTLPSNMKDVAKQAEGEGDSAMAAQLLENLEGPLLDDHVLTLDDHSLMKGHGGPALFRWLQDQALRSASVARYAEQVFQAASRSIAEKDEELRLARDEAVRKQESLKIMEDRLQDLNYQLASWRRKYEEAQEKWRIRESALETEVAMLVASFQNSRLQVQIPYPDIRRKEQMFSDKTSSVWAVNQHGRFFPAASWARPETGFFKVNCDGSVFEDEHKAGFGCVLRDSSGRWVRGCCGKVAVTSGLRLELWSLWRGLLLALEAGIEFLVCETDSMEAFSLVSGWRIPSDHVEKDLVMRFIELKRLQGWTVRFGLIRRDANSVADWLAKEGAHGEAASTVWLHPPGPLQLLLQKDLA 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00532 1156 Pfam Reverse transcriptase-like 1007 1129 IPR002156 GO:0003676|GO:0004523
Adu09g00532 1156 Pfam Leucine Rich Repeat 265 284 IPR011713 -
Adu09g00532 1156 SUPERFAMILY "Winged helix" DNA-binding domain 74 159 IPR036390 -
Adu09g00532 1156 PANTHER NB-ARC DOMAIN PROTEIN 1 614 - -
Adu09g00532 1156 Coils Coil 879 934 - -
Adu09g00532 1156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 95 IPR027417 -
Adu09g00532 1156 Gene3D - 4 87 IPR042197 -
Adu09g00532 1156 PRINTS Disease resistance protein signature 284 300 - -
Adu09g00532 1156 PRINTS Disease resistance protein signature 38 52 - -
Adu09g00532 1156 SUPERFAMILY Ribonuclease H-like 1004 1133 IPR012337 -
Adu09g00532 1156 Gene3D Ribonuclease Inhibitor 379 576 IPR032675 -
Adu09g00532 1156 Gene3D Ribonuclease Inhibitor 155 378 IPR032675 -
Adu09g00532 1156 SUPERFAMILY L domain-like 193 518 - -
Adu09g00532 1156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 614 IPR044974 GO:0006952
Adu09g00532 1156 CDD RNase_H_like 1006 1128 IPR044730 -
Adu09g00532 1156 Gene3D - 1004 1133 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00532 Adu-Chr9 6583605 6591774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00532 449 514 WRKY Transcription Factor Family AT4G12020 40.909 5.59e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00532 - - adu:110275611 2165.58