Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00512 ATGGCATTTTCACCCACTGAAAGAGGATCGATTACTACATTCACCAGTCCAACACAAGGCGATGAACAATTCAATGTGGATGAATTAGACATTCAAGAACAAGTAGGGTACAAGTTCGACGAAATTACCGATTTCGTTGTGACTAGAAAGGATGAGCTGGACGACGGACACCAGTTGTCGGATCATAGTGGCATAGGTGAAGAGGAAATTCTAGTCATAGGAATGAGTTTTGGTTCGTTGCCTCTCACACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACAAATTTCGACAAGACGCGGAAGGAATTAAAGATACCGGTTAATCAATCTATTTACTGCACGCACGAAGGTTATCGAGAATCTAGGGTGAACGCAGCAACTCGAGCAAATAAAATTACAGCCACGAGATGCAGAACAAGGATGCATGGTCTGCCATTTACATCCTTTGTAGGTATAAACCACCATGGAAAGTCTACTCTTCTTGGCTGTGCTTTACTTGGGAGCGAGGAGATTCCTAGTTTTGAGTGGGTGTTCACGCAGCGGCACATAATAAAGAAATCACAATTCAAGCTTGGTGGATACGCTAGGTACGGAGAACTGCATGCAATGAGGAATCACATTGTGTGGAATTCTCCTTCGATTGAATCGTTCAAGTCTGATTGGGCTGGTTTCATCAAACAGTTCAAGTTTGGCCAAAACAGATGGTTAGCAGTGGACGAGCAGAAGGTATTTTGGGGAAAGCTGGTCTACCATACTTTTAGGGTCGACTTTGACCCTTCGAGTCGAAAGGGTCGGTGCGAGTGCAACAAGTTTGAATCTGCTGGTATATTGTGTTGCCACACCATTGCGGTCTGGTCATACTACAGAGTTGACATAGTACCGAGTTGCTATGTTCTTCCTCGATGGAGTAAGAATGTCATCCGCAAGCACACTTACGAGTTTGTAGCTTGTGATGAGGAAGCAGCCATCTTGCGAGCTGCCCTTTGGGATGTAAAGTCCAAGCTGATTGATTACCGTGCCAGCATGCGTTCCACTAATGCTGCTGTGTCTCAGAATACCGTGCCCATACAGAGCACAGGCGGTGCGATTGTACATGACATTCAGGGACCCTCAAGAGTCAAAACCAAAGGACGGCCTAAGGgatga 1173 0.4476 MAFSPTERGSITTFTSPTQGDEQFNVDELDIQEQVGYKFDEITDFVVTRKDELDDGHQLSDHSGIGEEEILVIGMSFGSLPLTQKFYANYAKKVGFVTKIRNTNFDKTRKELKIPVNQSIYCTHEGYRESRVNAATRANKITATRCRTRMHGLPFTSFVGINHHGKSTLLGCALLGSEEIPSFEWVFTQRHIIKKSQFKLGGYARYGELHAMRNHIVWNSPSIESFKSDWAGFIKQFKFGQNRWLAVDEQKVFWGKLVYHTFRVDFDPSSRKGRCECNKFESAGILCCHTIAVWSYYRVDIVPSCYVLPRWSKNVIRKHTYEFVACDEEAAILRAALWDVKSKLIDYRASMRSTNAAVSQNTVPIQSTGGAIVHDIQGPSRVKTKGRPKG 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00512 390 PANTHER OS01G0607050 PROTEIN 260 359 - -
Adu09g00512 390 ProSiteProfiles Zinc finger SWIM-type profile. 260 298 IPR007527 GO:0008270
Adu09g00512 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 143 188 IPR031052 GO:0006355
Adu09g00512 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 260 359 IPR031052 GO:0006355
Adu09g00512 390 PANTHER OS01G0607050 PROTEIN 143 188 - -
Adu09g00512 390 SMART 26again6 273 300 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00512 Adu-Chr9 6333525 6337122 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g00512 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00512 - - adu:110274824 440.269