Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00508 ATGACGGCAAAGGCCAGTGAATACGAGGAGATTCGCCGGAAGAGGTTGGAGGAGAACAAGAAGAGGATGGAGGCCCTCAATCTCCCCAACCTCTCTCAGGCCCTCCACTCCTCTCCCCTTTCCAAATCCAAATCACACTCTCCCTCTCCGCTGAAGCGCGTCAAGTCACGCACCATTGAGAAGCAGGTGGTTGTGGTGAGGAGGTCCAGCCGCGTCGCCAACATGCCAGCTCCTGTTTACAAAGAAGTGGTTATTGATCGTGTAGTCACACCTAGAAGCCGCAGATATGGCGGCTCCTACGATCGCTACAGGGATTATTCAAAGCGGGTGTATGCTTCCGATGAAGCTAGACAGGAAGCCCTAGACAAGGCCGATAAGATACAATCCGATTTGCAGTCTAAGTCTCATCATCCATCCTTCGTTAAAACCATGCTCCAGTCTCACGTCACCGGCGGATTCTGGCTGGGTCTTTCAGTCCAGTTCTGTAAGACGCATCTTCCAAATCGTGACGAAAGAATTACTTTGATTGATGAGGATGGGGATGAGTATGAAACACTATATTTGGCTCGAAAAACAGGACTTAGTGCAGGATGGAGAGGCTTTTCAATTGCTCATAACCTAGTTGATGGGGATGCTTTGGTTTTTGAACTAATTAGCCGCACTACATTCAAGGTTTACATTATTAGAGTGAATAGTCCTGCAGAGGGTGAAGAGCAATGA 720 0.4861 MTAKASEYEEIRRKRLEENKKRMEALNLPNLSQALHSSPLSKSKSHSPSPLKRVKSRTIEKQVVVVRRSSRVANMPAPVYKEVVIDRVVTPRSRRYGGSYDRYRDYSKRVYASDEARQEALDKADKIQSDLQSKSHHPSFVKTMLQSHVTGGFWLGLSVQFCKTHLPNRDERITLIDEDGDEYETLYLARKTGLSAGWRGFSIAHNLVDGDALVFELISRTTFKVYIIRVNSPAEGEEQ 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00508 239 SUPERFAMILY DNA-binding pseudobarrel domain 133 231 IPR015300 -
Adu09g00508 239 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 3 235 IPR044837 -
Adu09g00508 239 MobiDBLite consensus disorder prediction 30 47 - -
Adu09g00508 239 SMART B3_2 140 231 IPR003340 GO:0003677
Adu09g00508 239 Coils Coil 6 26 - -
Adu09g00508 239 MobiDBLite consensus disorder prediction 20 55 - -
Adu09g00508 239 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS03G0184500 3 235 - -
Adu09g00508 239 CDD B3_DNA 138 229 IPR003340 GO:0003677
Adu09g00508 239 Pfam B3 DNA binding domain 140 229 IPR003340 GO:0003677
Adu09g00508 239 Gene3D - 112 232 IPR015300 -
Adu09g00508 239 ProSiteProfiles B3 DNA-binding domain profile. 140 231 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00508 Adu-Chr9 6302135 6303752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00508 8 237 B3 DNA Binding Superfamily AT3G19184 54.348 2.55e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu09g00508 B3 2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00508 - - gmx:100794327 298.901