Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00500 ATGAGCTCCTCAAACTCCACCATTACAACACGCACTGGCAACAGCACCACCCAGGCCTGTGCTGCCTGCAAATACCAACGCCGCAAATGCGCTCCCGATTGCATTCTCGCCCCCTATTTCCCCCATGACCGCCAACGCCAGTTCCTCAACGCTCACAAGCTTTTCGGCGTAAGCAACATCACCAAGATCATCAAGGTCCTTAATCCTCACGAAAAGGACGAAGCTATGAAAACCATCATCTTTCAATCCGATATGCGAGCCAAGGACCCCGTTGGCGGTTGCTATCGCATGGTACAAGATCTTCAGGCTCAGATCGAGTTTCACCTGGCCGAGTTGGAGCTCGTGCTTCAACAATTGGCTATACTTAGAGCCCAGGCCCAACATCAACAGGCCCAACATCTTTATAACCAAACCGCCACCAGTAATATTAATGTCAGCGTCAACGGAGATGACAGCATCAATTCAGATCCGTTGACGCTGTACAGTTCTGGTGGCAGTGGCGGCCTTGTTGTTGGTGGTAATGGGATTAACCATTACCATTACCTTCAACAAATGCCGCATCAGGATCAGTATATGATGGTGCAAGAGGTGAATGATAGCAGTAGCAACAACGGTACCCCTTTGCAAGAACATGCTAACATGTGGTCCATGCAAAATTCGCTTTCGTCGTTGTCGTTGCAGGGGCAGAATAGTAACTGTAGTGTTGGTGATGAGTATGATCATAAGCCAATGCTTGATATGGCTTCCGATGATAGAAATGAACTTGGATTTGAGCCTCAAGATTTAGTTCAGCGCAGTGATGAAGCAGTTTTGTTTAAGATAGATGATGCTGTAATAAAAGCAGAAACTGATTGCTTCCAACAAGTTCAAGACCATGATCTGAAAGGTGCAGCAACTTTGTTTACACTCACAAATTGTACTAGCTGA 927 0.4671 MSSSNSTITTRTGNSTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKVLNPHEKDEAMKTIIFQSDMRAKDPVGGCYRMVQDLQAQIEFHLAELELVLQQLAILRAQAQHQQAQHLYNQTATSNINVSVNGDDSINSDPLTLYSSGGSGGLVVGGNGINHYHYLQQMPHQDQYMMVQEVNDSSSNNGTPLQEHANMWSMQNSLSSLSLQGQNSNCSVGDEYDHKPMLDMASDDRNELGFEPQDLVQRSDEAVLFKIDDAVIKAETDCFQQVQDHDLKGAATLFTLTNCTS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00500 308 Coils Coil 98 132 - -
Adu09g00500 308 Pfam Lateral organ boundaries (LOB) domain 19 114 IPR004883 -
Adu09g00500 308 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Adu09g00500 308 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 242 - -
Adu09g00500 308 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 13 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00500 Adu-Chr9 6211995 6214093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00500 18 261 AS2 family AT3G13850 48.583 1.07e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu09g00500 LOB 3.4e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00500 - - pvu:PHAVU_010G138500g 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g01054 08 19182537 19183458 Adu09g00500 09 6211995 6214093 PCT