Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00489 ATGGCATTTTCAGATGCTTATTTTCCTACAGCTCCACCTCTCAGTAAGtatgatgtctttatcagtttcactggtaaggacacacgtaacggtttcactagtcatctctattctgctttgtgcagaaaccaaatcgaaacattcatagacaacagaattgagaaaggtggcgagatctgggaagaactcgtggaagccatcagagactcgatggtgtatctggtcatcttctctgaacactatgcccactccaagtggtgcttgtgggagctcgttgagatcatggaatgcaagaacaagaaggaagactgccatgttattcctgtcttctacatgatcgaaccaagccatgttcggaagcagaccggaagctactatggtgtgtttgaggattacgagagaaatttggacCCTGGCCTTGTGCGCCAGTGGAGGAAGGTACTCTTTGATGCAGCCAATATTGCAGGCTTCGAATATCATGGTCACCATAGCAGGACTGAATCTAACCTCATCGAAGGCATAATTCAAATGATTCTTCGGAAATTAAATCGCAAATATAGAAGTGAAGTCAGAAGTCCTTTTATATATGACCAAAACTACGCATGCATTGAATCTGTATTGACCCATTCAAAGGAAGTTCGAACCATTGGGATATGGGGCATGGGGGGTATAGGAAAAACAACAATTGCCACGGCTATCTTTCAAGAGTTCTCTCCCTTATATGAAGGTAGTTGCTTCTTGGCAAATGTAAGAGAAGAATCAGAAAGGCATGGCCTCAGTTACATATTCACTAGACTTCTTTGCGAGTTGCTACAAGAAGAGGTTTATATTAGCACTCCCAAGATAGTGTCCTCTGCTATTGTGCGCAGATTGAGGCGTAAGaaggttttcattgtgcttgatgatgtaaatacttctgagcttctggaaaatttgcttggagttggacatgattatcttggagctggtagcaaagttattgttacaacccgagataagcatgttcttctgagtagatcaattgatcacattcatgaagtcatgcaaatgaatgatgagaactctctcaaactatttagcttgaatgccttcaatagaatccatcctcccgatgaaaatggatatttggagctatcaaaaaggacacttgcctatgccaaaggtattccattagctttgaaagttttgggatcatttcttcattcaaaaagtgaaaaggaatgggacaatgcactggaaaagctaaaggagattccaaatgctgatattcaaaaggtgttgaggttgagcttcaatgatttagatcattcggagaaagatatatttctggatattgcatgttttttcaaagggcaagagaaagagaaagtaacaaccatattgaataagtgtggtttctacgcagatattggAATAAGAAATCTCTTAGACAAGGCTCTTATATCAATAGCTATGAACCAAAGCATACAAATGCATGACTTGATACAAGAAATGGGTCACAAAATTGTTTGGGAAGAATCTGTTGAGAATCCAGGAGGACGCAGTAGAGTGTGGAATGCTGATGAAGTTTGTGACATACTGAAAAATGATAAAGGAACTGATGCAATTGAAAGCATATTCTTGGATTTGACTCAAATCAAAGATCTAGAAATAAGCACCCATGCCTTTAGAAAAATGCTTAACTTAAGGCTACTTGCTTTTGCAAGTGGTAATATTAGTTTTGGTGGGAAGAGAATTACTAACACTTCAAGTATTCCAACAAATATGGTATTGCCTGATAACTTGAGATATATTCAGTGGGATGGATGTCCACTGAAGTCTCTATCATCTAGCTGCTGGCCTACCAAGCTTGTTGAGCTTTCTATGACTTACAGTGATGTTGAGAAACTTTGGGATGGTGCACAGATTCCGCCATTTAGGAATATGCATGTTCTGGTGAAAGTGGACATTTCTGACAGAGTGAGCAAGTTAGAATCTACCAAGTCTAGTGATAGCTTGCGTCATATTCACCCTTCTATTTTCTGTCTCCAAAAGCTTGATGGTTTATATGTGTATCATTGCAAAGGCCTAAAGAGTATATGCAGCAATAAGTGTTCACCCTCTCTTCGATCACTGGTGGCGTATGGTTGCCCCAATCTCCAAGAGTTCTCAGTCCCAATGTCGAGAGATCGTTCTGGAATTAATTTGCATCTAAGACTAACTGCTGTGGAACGATTACCACCATCAGTTTTTCATCTTAGAAATCTTCAACACTTCTCATTTGCAATCAGTGATGGTCTTATGGATCTTCCTTCAAATTTTGCCTACCAAATCATGCTTTCTGACCCTACCAAGCATGAATATAACACTGCAATCACCTTACATAAAGTACTACCTAGCCCAATCTTTCAATCTGTAAGGCGTCTGATTTTTGATAATTGTTGTAGCTTAACTGAAATCCCAGAAAATATCTCTCTGTTATCATCATTGGTCCACTTAAACCTATATCATTGCACCAATGTCATAAACTTACCCGAAAGCATTAAGTATCTTCCACGACTCCAGGTTCTTAGTGTATATCAATGCGAAATGCTTCAACTTATACCAATTCTTCCACCTTCTCTTAAACGCCTTAGGGTGTGGGACTGCCAAGCTCTAAAGACAGTATTGATCAGTGAATCACAGAGGAAAGATGAGGGTACTTTTATATTCCTTAACTGCATAAATTTGGATGAAGATTCATACAGTGCCATTTTAAGAGATGCTATTGTCAGGCCAGAGGTTGGGACACAATCACCATTAGCATCAAAACTCGAAAAGCAAGAAGATGCTTGCATCATTCTCGATCGTGATTGTTATGTAAATGTTGGCGAGACTTGTTGTTTCTTACCAGTTAGACACAATAAACTTCTTGATGAATTGTTCCATGAACACTCCACAGAAGCTTCTATAAGTGTTGAACTGACTTCAAGTTCCAAATTGTCTGGCTTCCTTTTGTACTTGGTTCTCTCTCAAGCACAGTTGTGTGACATTGAAGGACAGATATTGTACAACGTTGATGACTTCTTAAGTTTTGGATGCGAGTGCTACTTGGAAACAAGTTGTGGCGAAAAACTCCATACAAGAAGCTCGTCTGTGATACAATGGCACTGGGATCAGCTATATCACAGGGTGAATATCAAGTCGGATCATGTATTATTATGGTATGATGAAAAATGTTGCGAGAAGATAATCGAAACAATCAATGGCAAGAGATCCTCTTACAGCGCGAAACTTGCATTTAAATTCTTTGCTGGAATTGCTAATAAAATGGAAACAGTGATAAAAGGGTGTGGCATCCGCTGGATATATCAAAATGTGGAGGAAGAATCAAGAGAGCGTAAATCCAAAAGAAACAGGGAAGTTTATGAGTCAGTAGACATTGCATTCCAGATTGGACAAGGTTCTGAATCTCACCAGCAAGAACCAATTCCTCCAACCAAAAAGTTTAAGCAAAGTTTTCTGCTGACGTCAGCCTCATCAATTGTTGAAGCAGAAGCGGCTGAGGACCTGAGTACCCAAGTGCCTTCAAGTTCTAACTTGTGTGGGTTCATGTTCTACCTGGTTCTTTCTGAAGCACAATCATGCATCATTGATGAACTTGTTATTAACTTTGTGTGTGAATGTTACTTGGAAACAAGTTGGGGAGAAAGTATCCATGTAGCAAGTTCCGTTGTCGTCGAATGGGGCTGCGACATGACCATTGGATACCAGCTGAATGTTATGCAGGATCATGTGTTGTTATGGTATGATGAAGAATGTTCAAAGCAGATAATGGAAACAGTTAAAGGAAGAGAAGCTAATACTGAAAAGAAGTCCCATTTTAATGCAAAGATGACAGTTAAGTTCGTTGCTCGGCTACCAAACAAAGAGGAAGCAATGGTAAAAGAGTGTGGCATTCGATGGATATATTCAAATTTGGAGGAAGGATCATCAAGAGAGCAGAGATCCAAGAGAATCATTGGAAGTTAA 3990 0.3078 MAFSDAYFPTAPPLSKYDVFISFTGKDTRNGFTSHLYSALCRNQIETFIDNRIEKGGEIWEELVEAIRDSMVYLVIFSEHYAHSKWCLWELVEIMECKNKKEDCHVIPVFYMIEPSHVRKQTGSYYGVFEDYERNLDPGLVRQWRKVLFDAANIAGFEYHGHHSRTESNLIEGIIQMILRKLNRKYRSEVRSPFIYDQNYACIESVLTHSKEVRTIGIWGMGGIGKTTIATAIFQEFSPLYEGSCFLANVREESERHGLSYIFTRLLCELLQEEVYISTPKIVSSAIVRRLRRKKVFIVLDDVNTSELLENLLGVGHDYLGAGSKVIVTTRDKHVLLSRSIDHIHEVMQMNDENSLKLFSLNAFNRIHPPDENGYLELSKRTLAYAKGIPLALKVLGSFLHSKSEKEWDNALEKLKEIPNADIQKVLRLSFNDLDHSEKDIFLDIACFFKGQEKEKVTTILNKCGFYADIGIRNLLDKALISIAMNQSIQMHDLIQEMGHKIVWEESVENPGGRSRVWNADEVCDILKNDKGTDAIESIFLDLTQIKDLEISTHAFRKMLNLRLLAFASGNISFGGKRITNTSSIPTNMVLPDNLRYIQWDGCPLKSLSSSCWPTKLVELSMTYSDVEKLWDGAQIPPFRNMHVLVKVDISDRVSKLESTKSSDSLRHIHPSIFCLQKLDGLYVYHCKGLKSICSNKCSPSLRSLVAYGCPNLQEFSVPMSRDRSGINLHLRLTAVERLPPSVFHLRNLQHFSFAISDGLMDLPSNFAYQIMLSDPTKHEYNTAITLHKVLPSPIFQSVRRLIFDNCCSLTEIPENISLLSSLVHLNLYHCTNVINLPESIKYLPRLQVLSVYQCEMLQLIPILPPSLKRLRVWDCQALKTVLISESQRKDEGTFIFLNCINLDEDSYSAILRDAIVRPEVGTQSPLASKLEKQEDACIILDRDCYVNVGETCCFLPVRHNKLLDELFHEHSTEASISVELTSSSKLSGFLLYLVLSQAQLCDIEGQILYNVDDFLSFGCECYLETSCGEKLHTRSSSVIQWHWDQLYHRVNIKSDHVLLWYDEKCCEKIIETINGKRSSYSAKLAFKFFAGIANKMETVIKGCGIRWIYQNVEEESRERKSKRNREVYESVDIAFQIGQGSESHQQEPIPPTKKFKQSFLLTSASSIVEAEAAEDLSTQVPSSSNLCGFMFYLVLSEAQSCIIDELVINFVCECYLETSWGESIHVASSVVVEWGCDMTIGYQLNVMQDHVLLWYDEECSKQIMETVKGREANTEKKSHFNAKMTVKFVARLPNKEEAMVKECGIRWIYSNLEEGSSREQRSKRIIGS 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00489 1329 Pfam NB-ARC domain 205 425 IPR002182 GO:0043531
Adu09g00489 1329 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 828 - -
Adu09g00489 1329 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 798 885 - -
Adu09g00489 1329 Gene3D Ribonuclease Inhibitor 727 901 IPR032675 -
Adu09g00489 1329 Gene3D Ribonuclease Inhibitor 527 723 IPR032675 -
Adu09g00489 1329 Gene3D - 349 435 IPR042197 -
Adu09g00489 1329 PRINTS Disease resistance protein signature 386 400 - -
Adu09g00489 1329 PRINTS Disease resistance protein signature 290 304 - -
Adu09g00489 1329 PRINTS Disease resistance protein signature 842 858 - -
Adu09g00489 1329 PRINTS Disease resistance protein signature 215 230 - -
Adu09g00489 1329 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 157 IPR035897 -
Adu09g00489 1329 SUPERFAMILY L domain-like 490 880 - -
Adu09g00489 1329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 445 IPR027417 -
Adu09g00489 1329 SMART till_3 16 154 IPR000157 GO:0007165
Adu09g00489 1329 Pfam Leucine Rich Repeat 616 635 IPR011713 -
Adu09g00489 1329 Pfam TIR domain 16 188 IPR000157 GO:0007165
Adu09g00489 1329 Gene3D - 196 343 IPR027417 -
Adu09g00489 1329 Gene3D - 14 189 IPR035897 -
Adu09g00489 1329 ProSiteProfiles TIR domain profile. 15 182 IPR000157 GO:0007165
Adu09g00489 1329 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 828 IPR044974 GO:0006952
Adu09g00489 1329 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 798 885 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00489 Adu-Chr9 5960947 5976984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00489 8 850 WRKY Transcription Factor Family AT4G12020 30.334 2.16e-86 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00489 - - ahf:112708790 1456.81