Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00485 ATGGAGAAGGATTCAAGAGGGTGCAGCTTCAAGAGAAACAGGGGTGTTTTTGAGTTAGAAGCCATTGCATCTCCAAATGAACAAAAAGGGTTTGAATCTGATGATGAAGGGGAAGAACTAGTTCCTCCAACAAAGAAATTTAAGCATAGCTTAATGGAAGTTGAATCAGTAGAAAACTGGAGaatagaacccacacatgttcgcaagcagaccggaacttACCACACAGCATTCGCTGAGCACCAGAGATCTTTGGAGGGTAGCGTTGTGCAGCAATGGAGGACTGCACTCTTTGAAGCTTCCAATCTTTCTGGCTTCCATTGCGATCATCACAGGCAAGAAGCTGAGTTGATCGATGAGATTGTGAAAGCAATTTTTTCAAATTTGAATAACAATTGCTATAGAGATGAACTCAAAAGTCCCTTTATTTGTAACAGAAATTATACTTCTGTTAAATCTTTATTGAAATTCAAGTCGGAGAAAGTTCTTGTGATTGGAATTTGGGGTATGCCTGGAATTGGCAAGACAACAATTGCTACTACTCTTTTTCATGAGTGCTCCTCAGAATACGAAGGTCATTGCTTCTTAGCCTTTTCAAAAAATTTAGAAGGAAAAGGTCTTAATCACATATGCGCTAAACTTCTTTCTCAATTGTTAAATCAAGATCTTCGTATTGATAATATTCGAGTAATACAATCTAGTATTATCCGTAAAATCAAGCATAGAAAGGTCTTTGTTGTACTAGATGATGTGACTAATTCACAAATTGCAGCTGATTTGATTCAACTGTTTTGTAATTGTCTGAGTTCTGGTAGTAAAATCATTTTGACAACAAGAGATAGAAATGTGCTTACAAGCGGAGGAGTTGAAGAAATCCATGAAGTGAAGGAAATGAATTTTGAGGACTCTCTAAAACTTTTTAGCCATAATGCCTTTAGTGATTCTCATCCTAAAGAGGATTATTATGAGCTATCAACAAGAGTCGTAGCAGATTATGCCAAAGGAATACCATTAGCATTAAAAATTTTGGGATCATTTCTTCGGACTAAAGAAAAAAGTGAATGGGATAGTGCATTGAGAAAATTACAAAAGTATCCCAATCCAGATATTCAGCAAGTGTTGAGATTGAGTTATGATGCATTAGATGATGATGAAAAAAACATCCTGTTAGATATTGCATGCTTTTTCCACGATCATGAGATGAAGAAAATAACAAGAATATTAAATTCTTGTGGTTTCTTTGCAGACATAGGGATAAAAAGTCTATTGGATAAGTCTCTTGATATTCATGGAGTTGAAAGCATGATTATGGATATGAATGAAATTACAATAGATCCACGTATAATCATCATTGCATTAAGGAAGATGCCAAAGTTAAGGTTACTTGCTTTAAGAGGAAATATCAACATGGATCTTGAACGGAACAGAGTGTTTCTAGAGGATTTTCAACTTCCTAATGACTTAAGGTATATTGAGTGGGATAAATGCCCACTTAATTTTGTGCGGCCTATTTGTTGGCCTCAAAAACTTGTTCAGCTTTCTATGCGAGATAACAATGTTGAAAAACTTTGGGATACAGCACAGAATCTACCGAGTTTGGAGTTTATTGACCTTAAGGGCTGCAAACGCTTGACAGAGTGTCCAAATTTAGCAGGTTCCACGAATCTCAAAACAATATCACTCTTTCGCTGTGAAAGCTTACATGATGTTCATCCATCTATTTTCTCTCTCCCCAAGATTGAAAAACTAAATGTGAACTATTGCACATCGCTAAAGAGGCCTTGCAGTGACTATTGTTCTCCCTCTCTCCGTGGCTTGTGGGCCATTGGTTGCTCCAATTTGGAAGAGTTCTCAATCCCTCTCTCCAAACTATTCGGGTTATGTTTACCATCAACGGCTTTGAGTGAAGTGCCGTCCACTATTATGCATCTCAAAAATCTTGAGTTTTTTGGTTCTAACATCAGTTATTCTCTTGAGAAACTTCCTCTAAACTCTGTCCGAAAAATTCTACTCATGGATCCAATAAAATATGAAGACGACACATACATCATATTAAGTAGAATATTGCCCACCCCTGCCTTTCTGTCTCTCAAGGAATTAGCTTTCTTCAAATGTAATAGCTTGTCTAAACTCCCAGAGAACATTGATGTCTTACAATCATTACAAGTATTACAGCTGGTACATTGTCACGTTATTACAAGTTTGCCAAAAAGCATTAAGAATCTTCAACAGCTCATATATCTTAACATCGTTGATTGTAAAATGCTTCAAGATGTACCTCCACTTTCTCCATCTATTATGTTGGTTAATGCAGTAAACTGCAAATCCTTGAAGGAAGTCTCAAGTTTAACCAGTGAACCACCCAGAAAACGCAATGCATCGTTCGTATTCCATAACTGCACAAAGTTGGATGATGATGCATATGAAGCCGTTTTGAAAGATTTGAAATCCAGGATAGAACTTGTGGCAAATAATGATGGATATCTGCATAATGAAGCATACAATGGTAATAGACTCTTCTACTGTTTACCAAGTAAAGAGAGCATAATTAATGAGTGGTTCCCTGACTACTACTCTAGAGAAGCTTCAATCATTGTTGAAGTTGCTCCAGATCACAAGATTTCTTCTTGTCTTGTTGGCTGCATCTTGATTTCTCAATACCAATCTTTCAACCTTGGTAAGAAAAAAGTGATATTTGGATGGGAATGCTACTTGGGAAAGGGTTGCAACGAGTGGGAATGGATCGCATGTTCTGGCAATAGAACACCCTTGAGCAGATATGTTTCCGATGATGTGATTACATTGGAAATGGTGTCAGATCATAAGGTAGTATGGTATGATGGAGAGCCTTCCAAGAAGATAATGGAAGCAATCAAAGAGAGAAGAAAAGGCACCACTTGCAATCCTATCCTTAAATTTGAGTTCTATGCTCATACAGAAGATAATGAGGAAGTAGTGATAAAGGGGTGTGGGATCCGTTGGATGCATGTCCATGTCAGTCATGAAGGAGAGATTAGTCCAGATGCCACTCATGAGGGATATAAATCTCATGACTTGGAGTTGGAGGATGAATCTGATGAGTTGGAGTTGGAAGATGAATCTGATGGCTTGGAGTTGGAGGACATTGAGGTAATGTCAGTTGTTTTCACACATTATTGTTGTATTGTGAATTGTTTAGTCTAG 3183 0.3691 MEKDSRGCSFKRNRGVFELEAIASPNEQKGFESDDEGEELVPPTKKFKHSLMEVESVENWRIEPTHVRKQTGTYHTAFAEHQRSLEGSVVQQWRTALFEASNLSGFHCDHHRQEAELIDEIVKAIFSNLNNNCYRDELKSPFICNRNYTSVKSLLKFKSEKVLVIGIWGMPGIGKTTIATTLFHECSSEYEGHCFLAFSKNLEGKGLNHICAKLLSQLLNQDLRIDNIRVIQSSIIRKIKHRKVFVVLDDVTNSQIAADLIQLFCNCLSSGSKIILTTRDRNVLTSGGVEEIHEVKEMNFEDSLKLFSHNAFSDSHPKEDYYELSTRVVADYAKGIPLALKILGSFLRTKEKSEWDSALRKLQKYPNPDIQQVLRLSYDALDDDEKNILLDIACFFHDHEMKKITRILNSCGFFADIGIKSLLDKSLDIHGVESMIMDMNEITIDPRIIIIALRKMPKLRLLALRGNINMDLERNRVFLEDFQLPNDLRYIEWDKCPLNFVRPICWPQKLVQLSMRDNNVEKLWDTAQNLPSLEFIDLKGCKRLTECPNLAGSTNLKTISLFRCESLHDVHPSIFSLPKIEKLNVNYCTSLKRPCSDYCSPSLRGLWAIGCSNLEEFSIPLSKLFGLCLPSTALSEVPSTIMHLKNLEFFGSNISYSLEKLPLNSVRKILLMDPIKYEDDTYIILSRILPTPAFLSLKELAFFKCNSLSKLPENIDVLQSLQVLQLVHCHVITSLPKSIKNLQQLIYLNIVDCKMLQDVPPLSPSIMLVNAVNCKSLKEVSSLTSEPPRKRNASFVFHNCTKLDDDAYEAVLKDLKSRIELVANNDGYLHNEAYNGNRLFYCLPSKESIINEWFPDYYSREASIIVEVAPDHKISSCLVGCILISQYQSFNLGKKKVIFGWECYLGKGCNEWEWIACSGNRTPLSRYVSDDVITLEMVSDHKVVWYDGEPSKKIMEAIKERRKGTTCNPILKFEFYAHTEDNEEVVIKGCGIRWMHVHVSHEGEISPDATHEGYKSHDLELEDESDELELEDESDGLELEDIEVMSVVFTHYCCIVNCLV 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00485 1060 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 452 650 - -
Adu09g00485 1060 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 65 435 - -
Adu09g00485 1060 SUPERFAMILY L domain-like 449 787 - -
Adu09g00485 1060 Pfam NB-ARC domain 152 373 IPR002182 GO:0043531
Adu09g00485 1060 Gene3D - 139 290 IPR027417 -
Adu09g00485 1060 Gene3D - 48 135 IPR035897 -
Adu09g00485 1060 Gene3D - 298 382 IPR042197 -
Adu09g00485 1060 PRINTS Disease resistance protein signature 528 544 - -
Adu09g00485 1060 PRINTS Disease resistance protein signature 333 347 - -
Adu09g00485 1060 PRINTS Disease resistance protein signature 238 252 - -
Adu09g00485 1060 PRINTS Disease resistance protein signature 164 179 - -
Adu09g00485 1060 Gene3D Ribonuclease Inhibitor 418 595 IPR032675 -
Adu09g00485 1060 Gene3D Ribonuclease Inhibitor 596 788 IPR032675 -
Adu09g00485 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 452 650 IPR044974 GO:0006952
Adu09g00485 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 65 435 IPR044974 GO:0006952
Adu09g00485 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 392 IPR027417 -
Adu09g00485 1060 Pfam TIR domain 62 132 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00485 Adu-Chr9 5794530 5809771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00485 91 754 WRKY Transcription Factor Family AT4G12020 28.297 3.47e-51 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00485 - - aip:107614877 1599.72