Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00456 ATGGCAAAAGATGATGATGAAATGCCTAAGATCCTTCATGGAACAATTGAAGCTACCATCTTCAATGCCTCATCACCTCCCTCTTCTTCTTCATTTCCCTTCAAGTGTCTATGTTTAAAAGCAGAAAAACCAGCTTATGTGACAATCAAGATAGACAAGAACAAGGTTGCAAAAACAATTGAAGACATTGATCGTGTATGGAACCAAACGTTCAAGATCCAATGTGCATACCCAATTGATTCAACAATCACAATAACACTCAAAACAAAAACTTGCACATTAGGAAAGTACCACATAAAAGGCCAAAAGCTTCTAGAAGAAGGAGGCTTAATCAATGGATTCATCCCTCTATTAATGCAAGATAATAATGGGAAAAAACCAAACCAAAAACTCAAATTGAAGTTCCAGTTATGGTTCAATTCAGCTGAAGAATTATTGGAACCAATAAGTTGGGCAAAGATAATGAGGTTTGGGAATTGTTGTCAAGGAATGAGAGATTCTTCTACTACATTTCCACAAAGGTCTAATTGTTATGTCAAACTATATCATGATGCTCATCATTGTTCTACTTTTCAACCAAATATAACTGGTTTATTATGTGAAGCTCCAAGGAAGCTATGGGAGGATGTGTATAAAGCTATTGAGGGTGCAAAGCATATAATTTATATTGCAGCCTGGTCCCTCAATCCAAACTTGGTTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCCAAAGGAATAAAGCTTGGTGATTTATTGAAGAAGAAAGCAGAGGAAGGTGTTGCTGTGAGGATTATGCTTTGGGATGATGAAAAATCTTTGCCCTTTATTAAGAAGAACAAAGGTGTAATAACAAACAATAATAATGCACAACATCATGATGATGATGATGATGATGATGCTTTTGCTTACTTCAAGAAAACAAGAGTAATATGCACAAAGTGTCCTAGGTTGCACCACAAATTCCCAACACTCTTTTCTCACCACCAAAAGACTATAACATTGGACACAAAATCACCAAATAATTCTAGTGATGATGATGGTGAAGATGAGAGAGAACTAATGAGCTTTTTGGGAGGATTAGATTTGTGTGAAGGAAGATATGACACTGAGCAACATTCATTGTTTCACACACTGATTAGGGAATCACATTGTTATGATTTTTACCAACCAAACATTGGAGGAGCTAGTCTTAACAAAGGAGGGCCAAGAACACCTTGGCATGATGCTCATGCTTGTGTTATTGGTGAGGCTGCTTGGGATGTGTTGACCAACTTTGACCAAAGGTGGAGAAAGCAATGTGATTCTTCTTTTCTTGTTCCTACTACCACCATTGCAAATGTTGTTGGGCCAAGGAATAGCACAACTTCAAACACTTCCATAGACAAGGATTGGAATTGGAAAGTTCAAGTATACAGGTCAATTGATGATGTGTCAGCTAGCTTCCAAAGCCAATCATTTAGAGAGTTACATGTAGAAAGGAGCATCCATGAGGCTTATGTTGAAGCAATAAGAAGTGCTGAAAAGTTTATATACATTGAGAATGAATATTTCATTGGAGGGTGCCAATTATGGGACAAAGATAGGGATAGTGGATGCACAAACCTAATCCCAATTGAAATTGCACTCAAAATTGTTAGCAAGATCAAAGCAAAAGAGAGCTTTGCAGTGTACATAGTGATACCAATGTGGCCAGAGGGAGTGCCTAAAAGTGAAGCAGTTCAAGATATATTGCATTGGACTAGAGAAACTATGACTATGATGTATAGGTTAATTGGAGAAGCATTGAAGGAGAATGGGGAGAATAATAATAATGGTCACCCTAAAGATTATTTGAATTTCTTTTGCCTTGCAAATAGGGAACAAAAGGGGAGTGGGGAGTATATTCCACAACATGCTCCTCATCCTGGAACACTTTATGGGAATGCACAAAGTAATAGGAGGTTCATGGTTTATGTTCACTCCAAGTTCATGATAGTGGACGATGAATACATACTAATAGGATCAGCAAATGTGAACCAAAGATCCATGGATGGAGAAAGGGACAGTGAGATTGCCATAGGCTGCTACCAATTATCTCAAGATAATAAACATGAAGGTATGAGCCGTGGTGAGATTCATGCATTTAGAATGTCACTATGGTATGAACACACTGCTAGTAGTGCCAATTATGACTTGTTCTTGGAGCCACAAAGCTTGGAATGTGTCAACATTATGCGTTCAATTGGTGACAAAATGTGGCAAATTTACATCAATGATGAAATTGTGGACATGGAAGGTGTGCACCTTAGCGCTTTCTTCTTGTTTTCAACCTCCTCAGCGTTTGCAACTCCTTCCTCTTCCTCCACTCCTCCTCTGTCTCCGTTGGAAGGGAACATGGCAGTACCTGAGTCACCTCAATCAGCCAATTCTAGAACAGAATGCATGGAGGTTATCATAGCTGGTCAGTCCAATACCAAGGAGGATGAAGGACAACTTATGCAATTCGCTATTGGGCAGTGTATCACCACAGAGAAAGGTAGAAAGTGGAAAAGGTTAGCAAGACAAGGTGCTGCAGTGTCAGATACTAAAAGTGAACCCAAAAAAAGGTTGATGAGTGGTATAGCTAAAGGATCTACAAAGAAAGAAAGAATAGAGGATGAAAATGCAGTTGAACAgatggtggagggtgccagcctacaaatgccacccaaggcgccatga 2706 0.3803 MAKDDDEMPKILHGTIEATIFNASSPPSSSSFPFKCLCLKAEKPAYVTIKIDKNKVAKTIEDIDRVWNQTFKIQCAYPIDSTITITLKTKTCTLGKYHIKGQKLLEEGGLINGFIPLLMQDNNGKKPNQKLKLKFQLWFNSAEELLEPISWAKIMRFGNCCQGMRDSSTTFPQRSNCYVKLYHDAHHCSTFQPNITGLLCEAPRKLWEDVYKAIEGAKHIIYIAAWSLNPNLVLVRDPQTEIPHAKGIKLGDLLKKKAEEGVAVRIMLWDDEKSLPFIKKNKGVITNNNNAQHHDDDDDDDAFAYFKKTRVICTKCPRLHHKFPTLFSHHQKTITLDTKSPNNSSDDDGEDERELMSFLGGLDLCEGRYDTEQHSLFHTLIRESHCYDFYQPNIGGASLNKGGPRTPWHDAHACVIGEAAWDVLTNFDQRWRKQCDSSFLVPTTTIANVVGPRNSTTSNTSIDKDWNWKVQVYRSIDDVSASFQSQSFRELHVERSIHEAYVEAIRSAEKFIYIENEYFIGGCQLWDKDRDSGCTNLIPIEIALKIVSKIKAKESFAVYIVIPMWPEGVPKSEAVQDILHWTRETMTMMYRLIGEALKENGENNNNGHPKDYLNFFCLANREQKGSGEYIPQHAPHPGTLYGNAQSNRRFMVYVHSKFMIVDDEYILIGSANVNQRSMDGERDSEIAIGCYQLSQDNKHEGMSRGEIHAFRMSLWYEHTASSANYDLFLEPQSLECVNIMRSIGDKMWQIYINDEIVDMEGVHLSAFFLFSTSSAFATPSSSSTPPLSPLEGNMAVPESPQSANSRTECMEVIIAGQSNTKEDEGQLMQFAIGQCITTEKGRKWKRLARQGAAVSDTKSEPKKRLMSGIAKGSTKKERIEDENAVEQMVEGASLQMPPKAP 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00456 901 Gene3D Endonuclease Chain A 192 472 - -
Adu09g00456 901 SMART pld_4 325 368 IPR001736 GO:0003824
Adu09g00456 901 SMART pld_4 650 677 IPR001736 GO:0003824
Adu09g00456 901 Gene3D Endonuclease Chain A 489 699 - -
Adu09g00456 901 Pfam Phospholipase D C terminal 726 766 IPR024632 -
Adu09g00456 901 PANTHER PHOSPHOLIPASE D ALPHA 7 774 - -
Adu09g00456 901 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 121 IPR035892 -
Adu09g00456 901 SUPERFAMILY Phospholipase D/nuclease 464 726 - -
Adu09g00456 901 SUPERFAMILY Phospholipase D/nuclease 179 440 - -
Adu09g00456 901 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 650 677 IPR001736 GO:0003824
Adu09g00456 901 PANTHER PHOSPHOLIPASE D 7 774 IPR015679 -
Adu09g00456 901 MobiDBLite consensus disorder prediction 780 803 - -
Adu09g00456 901 MobiDBLite consensus disorder prediction 853 881 - -
Adu09g00456 901 MobiDBLite consensus disorder prediction 856 881 - -
Adu09g00456 901 Pfam Phospholipase D Active site motif 653 677 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00456 Adu-Chr9 5375675 5384359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00456 35 767 Phospholipase D Gene Family (Wang group) AT1G55180 57.703 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00456 K01115 - gmx:100812642 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00456 09 5375675 5384359 Adu09g00456 09 5375675 5384359 ECH
Adu08g01040 08 19016888 19019621 Adu09g00456 09 5375675 5384359 PCT