Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00452 ATGTATCAAATTTCTTGGATCCAAAGTGGGATAGTTAGAGATAACATACTCTTTGGCAAGCCAATAGACAAGAAAAGATATCAGAATACCATTAAGGCCTGTGCCTTGGATAAGGACATCAATGATTTAAGCCATGGGGATCTGACAGAAATCGTTGAGATGCCAAAAGTGACTAGTGCTGTTTTGATTGGAGTTTATGCATTGGTCTCATTTAGCAGTGCCTTTTTTTGCGTATCTGAGGCTTCATCAGATTTGAGTATTCTGGACCTTGATATACCTTATTCCATCACTTTTGCAGCATCTGTAGCTATTGAAATTGTCGTGATAATTGCTATAATGGCTTCAATCACATGGCAAGTTCTAATAGTTGCAATTCCTGCTACACTAGCATCAAAATACGTTCAGATGCATTCTAATGTGACCATGGAATGGTTGACTCTAAGGATTGAAACACTTCAAAATTTGACAGTCTTCACTGCAGCCTTGTTACTTATTCTAGTTCCTATGGATTATATGTTCCCAGGGCTTTTGGGACTTTTACTTTCTTATGCATTCACATTGACACAAGCACAAATATTTTGGACAAGATGGTTTTGCAACTTATCAAACTATGTTATCTCTTTGAAAGAATCAAACAATTCATTCACATACCATCAGCTGAGCCTCCTGCTATTGTGGAATGAACTTATTCACTTTCTTCAATCCTTAGAGATTAGATATCGTCGGAATGCACCAATAGTCCTGAAAGGAATCACTTGCACATTCAAAGAAGGGAGTAGAGTGGGAGTTGTAGTAAGGACAGGAAGTGGAAAAACAACACTTATAAGTGCTGTGTTTCAATTGGTTCAGCCTTCAAGAGGTAGCATTATTATTGATGAGATTGACATATGCTCATTGGGGTTGAAGGATTTGAGAATGAAGCTTAGTATTATCCCTCAAGAAGCAACCTTTTTTCAGGGGTAG 963 0.378 MYQISWIQSGIVRDNILFGKPIDKKRYQNTIKACALDKDINDLSHGDLTEIVEMPKVTSAVLIGVYALVSFSSAFFCVSEASSDLSILDLDIPYSITFAASVAIEIVVIIAIMASITWQVLIVAIPATLASKYVQMHSNVTMEWLTLRIETLQNLTVFTAALLLILVPMDYMFPGLLGLLLSYAFTLTQAQIFWTRWFCNLSNYVISLKESNNSFTYHQLSLLLLWNELIHFLQSLEIRYRRNAPIVLKGITCTFKEGSRVGVVVRTGSGKTTLISAVFQLVQPSRGSIIIDEIDICSLGLKDLRMKLSIIPQEATFFQG 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00452 320 Gene3D - 229 320 IPR027417 -
Adu09g00452 320 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 79 135 - -
Adu09g00452 320 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 79 135 - -
Adu09g00452 320 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 3 51 - -
Adu09g00452 320 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 3 51 - -
Adu09g00452 320 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 137 320 - -
Adu09g00452 320 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 137 320 - -
Adu09g00452 320 Pfam ABC transporter 248 319 IPR003439 GO:0005524
Adu09g00452 320 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 319 IPR027417 -
Adu09g00452 320 Gene3D - 1 67 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00452 Adu-Chr9 5270637 5273844 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00452 247 318 Calmodulin-binding Proteins AT2G36910 30.556 3.68e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00452 - - csat:109125179 268.855