Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00450 ATGGAATTCACAAAAGGAAATAAGGGTTGCGACACGATGGAAGGAAGCCAAAGGGAGGAGGGGTGTAGGCCTGATGAGGAATTGGATGATGCATGTGGCGGTGACAGCATGAATGGAGTATCGGATGAGTATCCATCCGATTATGCTTATGTATTCGGGTTGTCAGAACAAGATATAATAAGAAAAGTCTTTCGAAGTGAGGAAAGAGCATATGATTTTTACAGTAAATTTGGCAGATGTCATGGATTTGGCGTGCGCAAGGGTGATTATGGAAAGGATGAAGAAGGAAATTTGATAAGGAGAAGGTTTTTTTGTAATAGGGCCGGACTGAGAGATGAGAAACACTTGAACAGGTTGGATAGAAAAAGGGGACACCGTCCTGAAACAATGACTAATTGCTTGGCGAAGCTGTCGATTTATCTGGATAGGGAAAACTCAACATGGAAGGTTCGCAAAaagaatgtaACCTCAAATGGAGGCGAGCAGATGTTTCGTGAGATATTCTGTAAATGGCTTTATGCTGACATGGAGGTAGATGACTTCGAGCTTGAATGGGAAGAAGCTTCTGAGAAATTTGGTCTACACAAAAAATGTTGGGCAAACCAGATGTACGAAAAAAGGCACATGTGGTGTAATGCGTACCTTCGTGGCAAGTTTTGTGCTGGATATCGCACAACGTCTAGGTGTGAGGGAATAAATTCTCACATAAAGGGATTTTTGAACTCAAAACATAGTATTTTGGAATTGGTGCAAAATTTGGAGTTAGTAGTCCGAGAATACCGCAACAACGAGCTAGTTGCGCAATTCAATTCAATATATAGCACCCCTGTTCTAACAACGTGTCTGGATCCTATTGAGAGGTGCGCTGCAGATGTTTACACGAGAGCTATTTTTGTACTAGTTAAGAAAGAGATTGACGGTGTTGGAGCGATTAATTTTGTGAGTAAAAGGAGGGTCTCCACAACAATGGTATACACAATGGAAGAGTATGGTCATCCCGGCCACAACATTGTTACCTTATTTGATAGGACCATGACTAGAATGGAATGTCAGTGCCGATTCTGGGAGAAGGAGGGCTTTCCATGCAGACACATATTCTTTGTCATGAAGCACGAGCATTTAAAGGATATTCCAAATCGTTTAATTTTGAAGCGGTGGAGGAGGGACGCCAAGGCAATTGAAGAGTACGGCGATAAGACCGACGACATGTTGAGCGAGAGAGGTTTTCTATTGCGGCATGGGGCACTCCATGCGGCATCACAGTGGATGTTATACCTTGGTTCAAAGAATCGAACTGTATTTAAGACTGCAATGGAGGGAATTCGCGGAATTTGTACTGACATCCATGCAATACTTGGTCAACCGAATGAGGGAAGAAAAGCAAATGCGGACGAGCACATTCGGGATCCCGTTGTTGTTAGAACTAAAGGTGCTCCACGGTCCAAAGGCAAAAAGGGAAAGAAGAGGAGATGTACGTTTTGCAAAAGGACCGGCCACACAAAGCGGACATGTCTTGATAGGGTACCAAACCGATCCAAATGGGGTTTGCAAGAGGATGAAGAATCTGTCGAAATACCAGGGGCCAACGAGAACTTTATGGGGGTACATGAAACAAGTCTGCCTCCGAGGTCAGCATCGGTGTATTCACGAGATGGAAAAAATGTTTTGGCAGAATTAAAACCCGTGGGAACTCAGGAGAGGATCGTCGGAACTGCACAAAGTGAGATTCTAGCATCTGTTGCAGATGTAGGCAGTTGCGACTATCACCAACAGGTACTAGATCTCCTGAAATCGCTGAATGCAACAATAGGCTCAGATGGCATTGAGAAGTCCCAGTGA 1839 0.4383 MEFTKGNKGCDTMEGSQREEGCRPDEELDDACGGDSMNGVSDEYPSDYAYVFGLSEQDIIRKVFRSEERAYDFYSKFGRCHGFGVRKGDYGKDEEGNLIRRRFFCNRAGLRDEKHLNRLDRKRGHRPETMTNCLAKLSIYLDRENSTWKVRKKNVTSNGGEQMFREIFCKWLYADMEVDDFELEWEEASEKFGLHKKCWANQMYEKRHMWCNAYLRGKFCAGYRTTSRCEGINSHIKGFLNSKHSILELVQNLELVVREYRNNELVAQFNSIYSTPVLTTCLDPIERCAADVYTRAIFVLVKKEIDGVGAINFVSKRRVSTTMVYTMEEYGHPGHNIVTLFDRTMTRMECQCRFWEKEGFPCRHIFFVMKHEHLKDIPNRLILKRWRRDAKAIEEYGDKTDDMLSERGFLLRHGALHAASQWMLYLGSKNRTVFKTAMEGIRGICTDIHAILGQPNEGRKANADEHIRDPVVVRTKGAPRSKGKKGKKRRCTFCKRTGHTKRTCLDRVPNRSKWGLQEDEESVEIPGANENFMGVHETSLPPRSASVYSRDGKNVLAELKPVGTQERIVGTAQSEILASVADVGSCDYHQQVLDLLKSLNATIGSDGIEKSQ 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00450 612 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 63 152 - -
Adu09g00450 612 SUPERFAMILY Retrovirus zinc finger-like domains 477 512 IPR036875 GO:0003676|GO:0008270
Adu09g00450 612 MobiDBLite consensus disorder prediction 12 28 - -
Adu09g00450 612 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 152 IPR031052 GO:0006355
Adu09g00450 612 Pfam FAR1 DNA-binding domain 72 152 IPR004330 -
Adu09g00450 612 ProSiteProfiles Zinc finger SWIM-type profile. 335 373 IPR007527 GO:0008270
Adu09g00450 612 SMART 26again6 348 375 IPR006564 GO:0008270
Adu09g00450 612 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 164 406 IPR031052 GO:0006355
Adu09g00450 612 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 164 406 - -
Adu09g00450 612 MobiDBLite consensus disorder prediction 1 28 - -
Adu09g00450 612 Pfam SWIM zinc finger 350 367 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00450 Adu-Chr9 5207670 5211070 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu09g00450 FAR1 1.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00450 - - adu:110276719 489.574