Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00404 ATGGTTGCTAACACCAGGTTCATAACATTGCAGAAATTACCAATAACGTTCACTGAAAAATATGGTTCTGCCCTATCAAACCCATTGTATCTTAACCCTCCGGATGATACTGAATGGAGAGTAGATTGGACTAATCATGATGGTGAAATTTTGTTTAAAAAGGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGTCATTTGTTATGGTTTGAGTATAATACTAGAACTTCTCACATTAAAGTACACATATTTGACATGAGATGCCTCCAAATAGAGTATCCTGCCAATGATCAAATCAAAGAGCAGCTGCCACGCAGGGGTCAGCAACAGCCCGTAAAAAGGCCAGAAGAACCAAAAACTAGAGATGTGGATAGCAGTCCTAACACCCAAAACATGAGACTTAACCAGGGATGGCAGAAGAAAAGATTGTATGAACCATTGCCAAGAGATGTCTAG 465 0.3935 MVANTRFITLQKLPITFTEKYGSALSNPLYLNPPDDTEWRVDWTNHDGEILFKKGWKEFVAYYSLDHGHLLWFEYNTRTSHIKVHIFDMRCLQIEYPANDQIKEQLPRRGQQQPVKRPEEPKTRDVDSSPNTQNMRLNQGWQKKRLYEPLPRDV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00404 154 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 136 - -
Adu09g00404 154 Gene3D - 3 91 IPR015300 -
Adu09g00404 154 CDD B3_DNA 13 88 IPR003340 GO:0003677
Adu09g00404 154 SUPERFAMILY DNA-binding pseudobarrel domain 12 97 IPR015300 -
Adu09g00404 154 MobiDBLite consensus disorder prediction 102 154 - -
Adu09g00404 154 ProSiteProfiles B3 DNA-binding domain profile. 1 90 IPR003340 GO:0003677
Adu09g00404 154 PANTHER B3 DOMAIN-CONTAINING 12 136 - -
Adu09g00404 154 Pfam B3 DNA binding domain 12 88 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00404 Adu-Chr9 4565103 4565567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00404 12 96 B3 DNA Binding Superfamily AT3G18990 37.647 1.52e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu09g00404 B3 7.5e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00404 - - ahf:112771694 278.1