Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00394 ATGACGACTGTTCCAGGGCAATTGGTGTGGGAGATCGTGAAGAAGAACAACTGCTTCTTGGTGAAAGAGTTTGGAAGGGGCACTCAGAGTGTTGAATTCAGCAGAGAGCCTAACAATCTCTACAATCTCAACTCCTTTAAATACTCAGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGCTGGTAAGGATCAGGGTGTGTTGTTGGCTACAACCAAGACCAAGAAGCAGAACAAGCCTTCTGCTCTTCTTCACAAGTCTCTGATGAAGAAGGAGTTCAGTAGGATGGCTAAGGCTGTTCAAAATCAGGTGTCAAAAAACCACTACAGGCCTGATCTCACTAATGCAGCTCTTGCAAGGTTGAGTGCCGTCAATAGAAGCATCAGAGTTGCCAAGTCTGGTGTCAAGAAGAGGAACAGACAGGGCTTGAAGATCCGTGGCAGGAAGTGGAAGTGA 459 0.4619 MTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREPNNLYNLNSFKYSGLANKKTVTIQPAGKDQGVLLATTKTKKQNKPSALLHKSLMKKEFSRMAKAVQNQVSKNHYRPDLTNAALARLSAVNRSIRVAKSGVKKRNRQGLKIRGRKWK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00394 152 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Adu09g00394 152 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Adu09g00394 152 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Adu09g00394 152 Gene3D - 6 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00394 Adu-Chr9 4417522 4420483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00394 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 71.329 2.43e-74 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00394 K02903 - gmx:100499963 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00394 09 4417522 4420483 Adu07g01749 07 52639476 52643950 ECH
Adu09g00394 09 4417522 4420483 Adu09g00394 09 4417522 4420483 ECH
Adu07g01749 07 52639476 52643950 Adu09g00394 09 4417522 4420483 PCT